RNA–Protein interactions for RNA: ENST00000559321.1

LINC02253-201, Transcript of long intergenic non-protein coding RNA 2253, humanhuman

TSL 2 BASIC

Gene LINC02253, Length 448 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02253-201ENST00000559321 AEBP2Q6ZN18 517 aaPredicted RBP8.79□□□□□ -1
LINC02253-201ENST00000559321 CHIC1Q5VXU3 224 aa8.22□□□□□ -1.09
LINC02253-201ENST00000559321 POTEDQ86YR6 584 aa8.02□□□□□ -1.13
LINC02253-201ENST00000559321 SENP3Q9H4L4 574 aaPredicted RBP7.56□□□□□ -1.2
LINC02253-201ENST00000559321 PHF23Q9BUL5 403 aaPredicted RBP7.3□□□□□ -1.24
LINC02253-201ENST00000559321 FOXD1Q16676 465 aa7.05□□□□□ -1.28
LINC02253-201ENST00000559321 MSH5O43196 834 aa6.98□□□□□ -1.29
LINC02253-201ENST00000559321 PLPPR3Q6T4P5 718 aa6.93□□□□□ -1.3
LINC02253-201ENST00000559321 EHMT2Q96KQ7 1210 aa6.73□□□□□ -1.33
LINC02253-201ENST00000559321 KCNA4P22459 653 aa6.56□□□□□ -1.36
LINC02253-201ENST00000559321 SLC24A1O60721 1099 aa6.53□□□□□ -1.36
LINC02253-201ENST00000559321 PIAS4Q8N2W9 510 aaPredicted RBP6.53□□□□□ -1.36
LINC02253-201ENST00000559321 CACNB1Q02641 598 aaPredicted RBP6.5□□□□□ -1.37
LINC02253-201ENST00000559321 PPP6R1Q9UPN7 881 aa6.48□□□□□ -1.37
LINC02253-201ENST00000559321 CSRNP3Q8WYN3 585 aa6.46□□□□□ -1.38
LINC02253-201ENST00000559321 ADRA2BP18089 450 aa6.42□□□□□ -1.38
LINC02253-201ENST00000559321 SLC4A1APQ9BWU0 796 aaKnown RBP6.37□□□□□ -1.39
LINC02253-201ENST00000559321 AMER1Q5JTC6 1135 aaPredicted RBP6.31□□□□□ -1.4
LINC02253-201ENST00000559321 RTN4Q9NQC3 1192 aaKnown RBP6.21□□□□□ -1.42
LINC02253-201ENST00000559321 NCBP3Q53F19 620 aaKnown RBP6.18□□□□□ -1.42
LINC02253-201ENST00000559321 POTEHQ6S545 545 aa6.17□□□□□ -1.42
LINC02253-201ENST00000559321 PPP4R3CPQ6ZMV5 832 aa6.13□□□□□ -1.43
LINC02253-201ENST00000559321 ZBTB22O15209 634 aa6.05□□□□□ -1.44
LINC02253-201ENST00000559321 NPM3O75607 178 aaKnown RBP6.04□□□□□ -1.44
LINC02253-201ENST00000559321 MAPK8IP2Q13387 824 aaPredicted RBP5.98□□□□□ -1.45
LINC02253-201ENST00000559321 DNAJC5BQ9UF47 199 aa5.96□□□□□ -1.46
LINC02253-201ENST00000559321 FOXD4L1Q9NU39 408 aa5.95□□□□□ -1.46
LINC02253-201ENST00000559321 CNKSR2Q8WXI2 1034 aa5.88□□□□□ -1.47
LINC02253-201ENST00000559321 DCAF8L1A6NGE4 600 aa5.83□□□□□ -1.48
LINC02253-201ENST00000559321 DMRT2Q9Y5R5 561 aa5.83□□□□□ -1.48
LINC02253-201ENST00000559321 RNF39Q9H2S5 420 aa5.81□□□□□ -1.48
LINC02253-201ENST00000559321 FKBP8Q14318 412 aa5.79□□□□□ -1.48
LINC02253-201ENST00000559321 SCAF1Q9H7N4 1312 aaKnown RBP5.78□□□□□ -1.48
LINC02253-201ENST00000559321 ATXN8OSP0DMR3 200 aa5.76□□□□□ -1.49
LINC02253-201ENST00000559321 PLCB2Q00722 1185 aa5.75□□□□□ -1.49
LINC02253-201ENST00000559321 BCANQ96GW7 911 aa5.73□□□□□ -1.49
LINC02253-201ENST00000559321 C1QBPQ07021 282 aaKnown RBP5.72□□□□□ -1.49
LINC02253-201ENST00000559321 RNF216Q9NWF9 866 aaPredicted RBP5.66□□□□□ -1.5
LINC02253-201ENST00000559321 TAOK2Q9UL54 1235 aa5.66□□□□□ -1.5
LINC02253-201ENST00000559321 MYCNP04198 464 aaPredicted RBP5.62□□□□□ -1.51
LINC02253-201ENST00000559321 VSIG10Q8N0Z9 540 aa5.62□□□□□ -1.51
LINC02253-201ENST00000559321 PRKCSHP14314 528 aaPredicted RBP5.59□□□□□ -1.51
LINC02253-201ENST00000559321 HAP1P54257 671 aaPredicted RBP5.59□□□□□ -1.51
LINC02253-201ENST00000559321 DAXXQ9UER7 740 aaPredicted RBP5.59□□□□□ -1.51
LINC02253-201ENST00000559321 SLC4A2P04920 1241 aa5.56□□□□□ -1.52
LINC02253-201ENST00000559321 HOXD11P31277 338 aaPredicted RBP5.56□□□□□ -1.52
LINC02253-201ENST00000559321 PLSCR2Q9NRY7 297 aa5.55□□□□□ -1.52
LINC02253-201ENST00000559321 ARXQ96QS3 562 aa5.53□□□□□ -1.52
LINC02253-201ENST00000559321 FBXO3Q9UK99 471 aa5.53□□□□□ -1.52
LINC02253-201ENST00000559321 TPRNQ4KMQ1 711 aa5.52□□□□□ -1.53
LINC02253-201ENST00000559321 ERICH6Q7L0X2 663 aa5.52□□□□□ -1.53
LINC02253-201ENST00000559321 SP7Q8TDD2 431 aaPredicted RBP5.45□□□□□ -1.54
LINC02253-201ENST00000559321 TIMELESSQ9UNS1 1208 aa5.43□□□□□ -1.54
LINC02253-201ENST00000559321 DCAF8L2P0C7V8 631 aa5.41□□□□□ -1.54
LINC02253-201ENST00000559321 BBXQ8WY36 941 aaPredicted RBP5.41□□□□□ -1.54
LINC02253-201ENST00000559321 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.41□□□□□ -1.54
LINC02253-201ENST00000559321 KDM2AQ9Y2K7 1162 aa5.41□□□□□ -1.54
LINC02253-201ENST00000559321 VASPP50552 380 aaPredicted RBP5.4□□□□□ -1.54
LINC02253-201ENST00000559321 PROM2Q8N271 834 aa5.39□□□□□ -1.55
LINC02253-201ENST00000559321 TULP1O00294 542 aaPredicted RBP5.38□□□□□ -1.55
LINC02253-201ENST00000559321 PKD2Q13563 968 aa5.37□□□□□ -1.55
LINC02253-201ENST00000559321 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.36□□□□□ -1.55
LINC02253-201ENST00000559321 HNRNPUL2Q1KMD3 747 aaKnown RBP5.36□□□□□ -1.55
LINC02253-201ENST00000559321 GTF3C3Q9Y5Q9 886 aa5.36□□□□□ -1.55
LINC02253-201ENST00000559321 HOMEZQ8IX15 550 aa5.35□□□□□ -1.55
LINC02253-201ENST00000559321 SAMD1Q6SPF0 538 aaPredicted RBP5.34□□□□□ -1.55
LINC02253-201ENST00000559321 IFNLR1Q8IU57 520 aaPredicted RBP5.34□□□□□ -1.55
LINC02253-201ENST00000559321 FBLN2P98095 1184 aa5.33□□□□□ -1.56
LINC02253-201ENST00000559321 DNAJC5Q9H3Z4 198 aa5.32□□□□□ -1.56
LINC02253-201ENST00000559321 ATF5Q9Y2D1 282 aaPredicted RBP5.32□□□□□ -1.56
LINC02253-201ENST00000559321 SPDYE4A6NLX3 237 aa5.31□□□□□ -1.56
LINC02253-201ENST00000559321 PAXIP1Q6ZW49 1069 aaPredicted RBP5.31□□□□□ -1.56
LINC02253-201ENST00000559321 NBR1Q14596 966 aa5.3□□□□□ -1.56
LINC02253-201ENST00000559321 TMEM132AQ24JP5 1023 aa5.29□□□□□ -1.56
LINC02253-201ENST00000559321 SPRYD3Q8NCJ5 442 aa5.28□□□□□ -1.56
LINC02253-201ENST00000559321 CFAP44Q96MT7 982 aa5.27□□□□□ -1.57
LINC02253-201ENST00000559321 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.27□□□□□ -1.57
LINC02253-201ENST00000559321 NPM1P06748 294 aaKnown RBP eCLIP5.25□□□□□ -1.57
LINC02253-201ENST00000559321 ECM2O94769 699 aaPredicted RBP5.23□□□□□ -1.57
LINC02253-201ENST00000559321 CHRDL2Q6WN34 429 aa5.23□□□□□ -1.57
LINC02253-201ENST00000559321 SPINK5Q9NQ38 1064 aaPredicted RBP5.23□□□□□ -1.57
LINC02253-201ENST00000559321 ZNF219Q9P2Y4 722 aaPredicted RBP5.23□□□□□ -1.57
LINC02253-201ENST00000559321 TSHZ2Q9NRE2 1034 aa5.22□□□□□ -1.57
LINC02253-201ENST00000559321 U3KPZ7 1027 aaPredicted RBP5.22□□□□□ -1.57
LINC02253-201ENST00000559321 SPOCK2Q92563 424 aa5.21□□□□□ -1.58
LINC02253-201ENST00000559321 CAPN15O75808 1086 aa5.2□□□□□ -1.58
LINC02253-201ENST00000559321 C14orf37Q86TY3 774 aa5.2□□□□□ -1.58
LINC02253-201ENST00000559321 DSG3P32926 999 aa5.19□□□□□ -1.58
LINC02253-201ENST00000559321 APLP2Q06481 763 aa5.19□□□□□ -1.58
LINC02253-201ENST00000559321 RANGAP1P46060 587 aaPredicted RBP5.17□□□□□ -1.58
LINC02253-201ENST00000559321 MKRN4PQ13434 485 aaPredicted RBP5.16□□□□□ -1.58
LINC02253-201ENST00000559321 RGL2O15211 777 aa5.15□□□□□ -1.59
LINC02253-201ENST00000559321 KLHL34Q8N239 644 aa5.12□□□□□ -1.59
LINC02253-201ENST00000559321 HAX1O00165 279 aa5.11□□□□□ -1.59
LINC02253-201ENST00000559321 HS6ST3Q8IZP7 471 aa5.11□□□□□ -1.59
LINC02253-201ENST00000559321 TRIM41Q8WV44 630 aa5.11□□□□□ -1.59
LINC02253-201ENST00000559321 CHGAP10645 457 aaKnown RBP5.1□□□□□ -1.59
LINC02253-201ENST00000559321 LHX8Q68G74 356 aa5.1□□□□□ -1.59
LINC02253-201ENST00000559321 RBM42Q9BTD8 480 aaKnown RBP5.1□□□□□ -1.59
LINC02253-201ENST00000559321 ABCB7O75027 752 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms