Protein–RNA interactions for Protein: Q9BYQ6

KRTAP4-11, Keratin-associated protein 4-11, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-11Q9BYQ6 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 CD101-201ENST00000256652 3283 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 DBF4B-201ENST00000315005 2997 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 ASB15-205ENST00000451215 2956 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 ARNT2-207ENST00000533983 6690 ntAPPRIS ALT1 TSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 KCNT2-201ENST00000294725 4409 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 EYA4-203ENST00000367895 5699 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 KLHL8-202ENST00000425278 4049 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 MCC-209ENST00000515367 3844 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 TMOD3-201ENST00000308580 8255 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 GANAB-202ENST00000356638 3608 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 CALCR-205ENST00000421592 3626 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 ARHGEF7-203ENST00000375723 4957 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 COL12A1-201ENST00000322507 11723 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 HIPK1-206ENST00000369559 3424 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 NCAM1-222ENST00000615285 6045 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 NEPRO-202ENST00000383675 4672 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 DHX35-201ENST00000252011 3325 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 PALLD-201ENST00000261509 5809 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 SPIN3-211ENST00000638712 4286 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 SEL1L-201ENST00000336735 7925 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 CMKLR1-202ENST00000412676 5110 ntAPPRIS ALT2 TSL 3 BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 FAM86EP-201ENST00000313946 2845 ntTSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 FREM1-202ENST00000380880 7324 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 CACNA2D4-222ENST00000587995 3883 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 RASGRP1-213ENST00000561180 2707 ntTSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 AC087762.2-201ENST00000639346 3773 ntBASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 FN1-209ENST00000432072 7759 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 HHAT-204ENST00000413764 3575 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 USP8-204ENST00000425032 3559 ntTSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 GPR182-201ENST00000300098 3451 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 LILRA2-201ENST00000251376 4429 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 ATP7B-205ENST00000418097 4340 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 AP000350.7-201ENST00000624923 8030 ntBASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 HIP1-204ENST00000434438 7066 ntTSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 NET1-202ENST00000380359 3253 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 ACSL5-205ENST00000433418 3281 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 NHLRC3-203ENST00000470258 3298 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 AC025031.4-201ENST00000621248 3271 ntBASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 ZMYND8-205ENST00000360911 4991 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 UACA-203ENST00000539319 4026 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 RNU6-810P-201ENST00000364001 107 ntBASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 RN7SKP48-201ENST00000365031 328 ntBASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 MIR451A-201ENST00000385059 72 ntBASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 IGHV2-5-201ENST00000390597 378 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 SNORD86-201ENST00000391196 86 ntBASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 PPIAP30-201ENST00000415473 519 ntBASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 AC008155.1-201ENST00000421078 329 ntBASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 AL354710.1-201ENST00000453641 246 ntBASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 PRKAG2-AS1-201ENST00000464464 382 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 RPL23AP42-201ENST00000471152 471 ntBASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 RN7SL502P-201ENST00000481857 290 ntBASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 RN7SL655P-201ENST00000486087 298 ntBASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 RN7SL153P-201ENST00000486501 292 ntBASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 AC116353.1-201ENST00000489727 316 ntBASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 AC113208.1-201ENST00000497944 318 ntBASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 AC010608.1-201ENST00000507964 275 ntTSL 4 BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 RNU11-2P-201ENST00000516898 142 ntBASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 AC023632.4-201ENST00000517783 191 ntBASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 AC116917.1-201ENST00000520558 305 ntBASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 AC139085.1-201ENST00000582716 182 ntBASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 RN7SL667P-201ENST00000582817 298 ntBASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 FKBP1AP1-201ENST00000594588 318 ntBASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 RNU1-30P-201ENST00000606575 163 ntBASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 MIR6509-201ENST00000614603 85 ntBASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 PCBP1-AS1-322ENST00000628147 553 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 ZEB2-236ENST00000636471 9583 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 C11orf45-201ENST00000310799 3624 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 ZFYVE1-201ENST00000318876 4362 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 RPAP3-201ENST00000005386 4370 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 PNMA8C-201ENST00000617053 4255 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 VIL1-201ENST00000248444 6531 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 FRRS1-201ENST00000287474 2678 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 GLDCP1-201ENST00000510885 2678 ntBASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 UBAP2L-202ENST00000343815 3411 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 AL590004.4-201ENST00000566733 7060 ntBASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 TMEM196-202ENST00000405844 4054 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 SP1-202ENST00000426431 7603 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 MCM3-207ENST00000616552 3208 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 SLFN13-211ENST00000542635 5921 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 L3MBTL4-202ENST00000400104 4534 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 ADCY10P1-202ENST00000457653 3785 ntBASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 AC023824.7-201ENST00000623041 5731 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 181 ms