RNA–Protein interactions for RNA: ENST00000347616.5

CNTN1-201, Transcript of contactin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTN1, Length 5,507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1-201ENST00000347616 NISCHQ9Y2I1 1504 aa8.66□□□□□ -1.02
CNTN1-201ENST00000347616 SHROOM4Q9ULL8 1493 aa7.76□□□□□ -1.17
CNTN1-201ENST00000347616 SUPT5HO00267 1087 aaKnown RBP7.74□□□□□ -1.17
CNTN1-201ENST00000347616 DCAF8L2P0C7V8 631 aa7.64□□□□□ -1.19
CNTN1-201ENST00000347616 CCDC180Q9P1Z9 1646 aa7.58□□□□□ -1.2
CNTN1-201ENST00000347616 PCGF6Q9BYE7 350 aa7.44□□□□□ -1.22
CNTN1-201ENST00000347616 HRCP23327 699 aa7.41□□□□□ -1.22
CNTN1-201ENST00000347616 CHIC1Q5VXU3 224 aa7.4□□□□□ -1.22
CNTN1-201ENST00000347616 ZCCHC6Q5VYS8 1495 aaKnown RBP7.3□□□□□ -1.24
CNTN1-201ENST00000347616 AEBP2Q6ZN18 517 aaPredicted RBP7.28□□□□□ -1.24
CNTN1-201ENST00000347616 LOC105371045A0A1W2PR82 267 aa7.25□□□□□ -1.25
CNTN1-201ENST00000347616 PPARGC1BQ86YN6 1023 aaKnown RBP7.25□□□□□ -1.25
CNTN1-201ENST00000347616 MYO15BQ96JP2 1530 aa7.23□□□□□ -1.25
CNTN1-201ENST00000347616 TRIM26Q12899 539 aaPredicted RBP7.22□□□□□ -1.25
CNTN1-201ENST00000347616 EHMT2Q96KQ7 1210 aa7.2□□□□□ -1.26
CNTN1-201ENST00000347616 FAM9AQ8IZU1 332 aaPredicted RBP7.2□□□□□ -1.26
CNTN1-201ENST00000347616 ZEB1P37275 1124 aaPredicted RBP7.19□□□□□ -1.26
CNTN1-201ENST00000347616 TRIM41Q8WV44 630 aa7.18□□□□□ -1.26
CNTN1-201ENST00000347616 DCAF1Q9Y4B6 1507 aa7.14□□□□□ -1.27
CNTN1-201ENST00000347616 PELP1Q8IZL8 1130 aaKnown RBP7.06□□□□□ -1.28
CNTN1-201ENST00000347616 CCER1Q8TC90 406 aaPredicted RBP7.03□□□□□ -1.28
CNTN1-201ENST00000347616 UNC13AQ9UPW8 1703 aa7□□□□□ -1.29
CNTN1-201ENST00000347616 TTBK1Q5TCY1 1321 aaPredicted RBP6.99□□□□□ -1.29
CNTN1-201ENST00000347616 CENPBP07199 599 aaPredicted RBP6.96□□□□□ -1.29
CNTN1-201ENST00000347616 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.94□□□□□ -1.3
CNTN1-201ENST00000347616 RSF1Q96T23 1441 aaPredicted RBP6.94□□□□□ -1.3
CNTN1-201ENST00000347616 SCRIBQ14160 1630 aa6.93□□□□□ -1.3
CNTN1-201ENST00000347616 UBTFP17480 764 aaKnown RBP6.9□□□□□ -1.31
CNTN1-201ENST00000347616 ABCC9O60706 1549 aa6.89□□□□□ -1.31
CNTN1-201ENST00000347616 DIEXFQ68CQ4 756 aaKnown RBP6.88□□□□□ -1.31
CNTN1-201ENST00000347616 SCAF1Q9H7N4 1312 aaKnown RBP6.88□□□□□ -1.31
CNTN1-201ENST00000347616 APLP2Q06481 763 aa6.87□□□□□ -1.31
CNTN1-201ENST00000347616 NACADO15069 1562 aa6.86□□□□□ -1.31
CNTN1-201ENST00000347616 ACIN1Q9UKV3 1341 aaKnown RBP6.85□□□□□ -1.31
CNTN1-201ENST00000347616 RB1CC1Q8TDY2 1594 aa6.84□□□□□ -1.31
CNTN1-201ENST00000347616 YTHDC1Q96MU7 727 aaKnown RBP6.84□□□□□ -1.32
CNTN1-201ENST00000347616 GTF3C3Q9Y5Q9 886 aa6.82□□□□□ -1.32
CNTN1-201ENST00000347616 RANGAP1P46060 587 aaPredicted RBP6.8□□□□□ -1.32
CNTN1-201ENST00000347616 NEUROD1Q13562 356 aa6.79□□□□□ -1.32
CNTN1-201ENST00000347616 MYT1Q01538 1121 aa6.79□□□□□ -1.32
CNTN1-201ENST00000347616 HNRNPUL2Q1KMD3 747 aaKnown RBP6.79□□□□□ -1.32
CNTN1-201ENST00000347616 CECR2Q9BXF3 1484 aa6.78□□□□□ -1.32
CNTN1-201ENST00000347616 ZNF316A6NFI3 1004 aaPredicted RBP6.77□□□□□ -1.33
CNTN1-201ENST00000347616 CSRNP3Q8WYN3 585 aa6.76□□□□□ -1.33
CNTN1-201ENST00000347616 MROH2BQ7Z745 1585 aa6.74□□□□□ -1.33
CNTN1-201ENST00000347616 SENP3Q9H4L4 574 aaPredicted RBP6.74□□□□□ -1.33
CNTN1-201ENST00000347616 BICRAQ9NZM4 1560 aa6.73□□□□□ -1.33
CNTN1-201ENST00000347616 CEP162Q5TB80 1403 aa6.72□□□□□ -1.33
CNTN1-201ENST00000347616 TNIKQ9UKE5 1360 aa6.69□□□□□ -1.34
CNTN1-201ENST00000347616 WIZO95785 1651 aa6.69□□□□□ -1.34
CNTN1-201ENST00000347616 BAZ1AQ9NRL2 1556 aaPredicted RBP6.68□□□□□ -1.34
CNTN1-201ENST00000347616 EEA1Q15075 1411 aa6.67□□□□□ -1.34
CNTN1-201ENST00000347616 PABPN1Q86U42 306 aaKnown RBP eCLIP6.67□□□□□ -1.34
CNTN1-201ENST00000347616 SOGA1O94964 1423 aa6.65□□□□□ -1.34
CNTN1-201ENST00000347616 CCDC88BA6NC98 1476 aa6.65□□□□□ -1.34
CNTN1-201ENST00000347616 MIER1Q8N108 512 aa6.65□□□□□ -1.35
CNTN1-201ENST00000347616 ABCC8Q09428 1581 aa6.65□□□□□ -1.35
CNTN1-201ENST00000347616 GOLGA3Q08378 1498 aa6.64□□□□□ -1.35
CNTN1-201ENST00000347616 WRNQ14191 1432 aaPredicted RBP eCLIP6.64□□□□□ -1.35
CNTN1-201ENST00000347616 ITGAEP38570 1179 aa6.63□□□□□ -1.35
CNTN1-201ENST00000347616 CLIP1P30622 1438 aa6.62□□□□□ -1.35
CNTN1-201ENST00000347616 TOP2AP11388 1531 aaKnown RBP6.6□□□□□ -1.35
CNTN1-201ENST00000347616 CEP164Q9UPV0 1460 aa6.59□□□□□ -1.36
CNTN1-201ENST00000347616 ATP1B4Q9UN42 357 aaPredicted RBP6.58□□□□□ -1.36
CNTN1-201ENST00000347616 NEFLP07196 543 aa6.57□□□□□ -1.36
CNTN1-201ENST00000347616 RUSC2Q8N2Y8 1516 aa6.56□□□□□ -1.36
CNTN1-201ENST00000347616 CLSPNQ9HAW4 1339 aa6.56□□□□□ -1.36
CNTN1-201ENST00000347616 PEG3Q9GZU2 1588 aa6.55□□□□□ -1.36
CNTN1-201ENST00000347616 SMARCA4P51532 1647 aa6.54□□□□□ -1.36
CNTN1-201ENST00000347616 VPS8Q8N3P4 1428 aa6.54□□□□□ -1.36
CNTN1-201ENST00000347616 SMARCA2P51531 1590 aa6.54□□□□□ -1.36
CNTN1-201ENST00000347616 FAM50AQ14320 339 aaKnown RBP6.51□□□□□ -1.37
CNTN1-201ENST00000347616 BCANQ96GW7 911 aa6.5□□□□□ -1.37
CNTN1-201ENST00000347616 PRDM2Q13029 1718 aa6.49□□□□□ -1.37
CNTN1-201ENST00000347616 BAZ1BQ9UIG0 1483 aaKnown RBP6.49□□□□□ -1.37
CNTN1-201ENST00000347616 RAPGEF2Q9Y4G8 1499 aa6.47□□□□□ -1.37
CNTN1-201ENST00000347616 SUPT16HQ9Y5B9 1047 aaKnown RBP6.47□□□□□ -1.37
CNTN1-201ENST00000347616 EIF4G1Q04637 1599 aaKnown RBP6.47□□□□□ -1.37
CNTN1-201ENST00000347616 DDX10Q13206 875 aaKnown RBP6.46□□□□□ -1.38
CNTN1-201ENST00000347616 ERICH6Q7L0X2 663 aa6.46□□□□□ -1.38
CNTN1-201ENST00000347616 KANK4Q5T7N3 995 aaPredicted RBP6.46□□□□□ -1.38
CNTN1-201ENST00000347616 ANP32CO43423 234 aa6.45□□□□□ -1.38
CNTN1-201ENST00000347616 FKBP8Q14318 412 aa6.45□□□□□ -1.38
CNTN1-201ENST00000347616 DHX57Q6P158 1386 aaKnown RBP6.44□□□□□ -1.38
CNTN1-201ENST00000347616 CCNB3Q8WWL7 1395 aa6.44□□□□□ -1.38
CNTN1-201ENST00000347616 KIF27Q86VH2 1401 aa6.43□□□□□ -1.38
CNTN1-201ENST00000347616 P3H3Q8IVL6 736 aa6.43□□□□□ -1.38
CNTN1-201ENST00000347616 KIF21BO75037 1637 aa6.43□□□□□ -1.38
CNTN1-201ENST00000347616 PHF23Q9BUL5 403 aaPredicted RBP6.43□□□□□ -1.38
CNTN1-201ENST00000347616 SYNJ1O43426 1573 aa6.42□□□□□ -1.38
CNTN1-201ENST00000347616 ATAD2BQ9ULI0 1458 aa6.41□□□□□ -1.38
CNTN1-201ENST00000347616 TRIM52Q96A61 297 aa6.4□□□□□ -1.39
CNTN1-201ENST00000347616 HIRIP3Q9BW71 556 aaPredicted RBP6.39□□□□□ -1.39
CNTN1-201ENST00000347616 POTEDQ86YR6 584 aa6.39□□□□□ -1.39
CNTN1-201ENST00000347616 SIN3AQ96ST3 1273 aa6.39□□□□□ -1.39
CNTN1-201ENST00000347616 TONSLQ96HA7 1378 aa6.38□□□□□ -1.39
CNTN1-201ENST00000347616 RAB3GAP2Q9H2M9 1393 aa6.38□□□□□ -1.39
CNTN1-201ENST00000347616 ANP32EQ9BTT0 268 aa6.38□□□□□ -1.39
CNTN1-201ENST00000347616 TSHZ2Q9NRE2 1034 aa6.38□□□□□ -1.39
CNTN1-201ENST00000347616 HMGXB3Q12766 1538 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms