Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
TNFRSF11AQ9Y6Q6 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TNFRSF11AQ9Y6Q6 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TNFRSF11AQ9Y6Q6 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC23.41■■□□□ 1.34
TNFRSF11AQ9Y6Q6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC23.41■■□□□ 1.34
TNFRSF11AQ9Y6Q6 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC23.41■■□□□ 1.34
TNFRSF11AQ9Y6Q6 FAM210CP-201ENST00000445714 574 ntBASIC23.41■■□□□ 1.34
TNFRSF11AQ9Y6Q6 AP003041.3-201ENST00000527151 707 ntBASIC23.41■■□□□ 1.34
TNFRSF11AQ9Y6Q6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC23.41■■□□□ 1.34
TNFRSF11AQ9Y6Q6 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC23.41■■□□□ 1.34
TNFRSF11AQ9Y6Q6 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TNFRSF11AQ9Y6Q6 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TNFRSF11AQ9Y6Q6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC23.41■■□□□ 1.34
TNFRSF11AQ9Y6Q6 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC23.41■■□□□ 1.34
TNFRSF11AQ9Y6Q6 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC23.41■■□□□ 1.34
TNFRSF11AQ9Y6Q6 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
TNFRSF11AQ9Y6Q6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TNFRSF11AQ9Y6Q6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TNFRSF11AQ9Y6Q6 KRT18P22-201ENST00000402024 1347 ntBASIC23.4■■□□□ 1.34
TNFRSF11AQ9Y6Q6 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
TNFRSF11AQ9Y6Q6 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC23.4■■□□□ 1.34
TNFRSF11AQ9Y6Q6 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TNFRSF11AQ9Y6Q6 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TNFRSF11AQ9Y6Q6 AL353719.1-201ENST00000566847 864 ntBASIC23.4■■□□□ 1.34
TNFRSF11AQ9Y6Q6 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC23.4■■□□□ 1.34
TNFRSF11AQ9Y6Q6 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TNFRSF11AQ9Y6Q6 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TNFRSF11AQ9Y6Q6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TNFRSF11AQ9Y6Q6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
TNFRSF11AQ9Y6Q6 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TNFRSF11AQ9Y6Q6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TNFRSF11AQ9Y6Q6 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
TNFRSF11AQ9Y6Q6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
TNFRSF11AQ9Y6Q6 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
TNFRSF11AQ9Y6Q6 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
TNFRSF11AQ9Y6Q6 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
TNFRSF11AQ9Y6Q6 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
TNFRSF11AQ9Y6Q6 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
TNFRSF11AQ9Y6Q6 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
TNFRSF11AQ9Y6Q6 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
TNFRSF11AQ9Y6Q6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC23.39■■□□□ 1.33
TNFRSF11AQ9Y6Q6 AC113347.1-201ENST00000413321 391 ntBASIC23.39■■□□□ 1.33
TNFRSF11AQ9Y6Q6 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC23.39■■□□□ 1.33
TNFRSF11AQ9Y6Q6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC23.39■■□□□ 1.33
TNFRSF11AQ9Y6Q6 CFL2-205ENST00000555765 632 ntTSL 2 BASIC23.39■■□□□ 1.33
TNFRSF11AQ9Y6Q6 AL161938.1-201ENST00000569833 2180 ntBASIC23.39■■□□□ 1.33
TNFRSF11AQ9Y6Q6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC23.39■■□□□ 1.33
TNFRSF11AQ9Y6Q6 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TNFRSF11AQ9Y6Q6 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC23.39■■□□□ 1.33
TNFRSF11AQ9Y6Q6 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
TNFRSF11AQ9Y6Q6 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TNFRSF11AQ9Y6Q6 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC23.39■■□□□ 1.33
TNFRSF11AQ9Y6Q6 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC23.38■■□□□ 1.33
TNFRSF11AQ9Y6Q6 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
TNFRSF11AQ9Y6Q6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TNFRSF11AQ9Y6Q6 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC23.38■■□□□ 1.33
TNFRSF11AQ9Y6Q6 SLC25A1P2-201ENST00000430693 912 ntBASIC23.38■■□□□ 1.33
TNFRSF11AQ9Y6Q6 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC23.38■■□□□ 1.33
TNFRSF11AQ9Y6Q6 UBQLN4P1-201ENST00000461599 1801 ntBASIC23.38■■□□□ 1.33
TNFRSF11AQ9Y6Q6 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
TNFRSF11AQ9Y6Q6 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TNFRSF11AQ9Y6Q6 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TNFRSF11AQ9Y6Q6 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
TNFRSF11AQ9Y6Q6 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC23.37■■□□□ 1.33
TNFRSF11AQ9Y6Q6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
TNFRSF11AQ9Y6Q6 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TNFRSF11AQ9Y6Q6 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
TNFRSF11AQ9Y6Q6 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TNFRSF11AQ9Y6Q6 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC23.37■■□□□ 1.33
TNFRSF11AQ9Y6Q6 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TNFRSF11AQ9Y6Q6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC23.37■■□□□ 1.33
TNFRSF11AQ9Y6Q6 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
TNFRSF11AQ9Y6Q6 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC23.37■■□□□ 1.33
TNFRSF11AQ9Y6Q6 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TNFRSF11AQ9Y6Q6 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
TNFRSF11AQ9Y6Q6 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TNFRSF11AQ9Y6Q6 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC23.37■■□□□ 1.33
TNFRSF11AQ9Y6Q6 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC23.37■■□□□ 1.33
TNFRSF11AQ9Y6Q6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC23.37■■□□□ 1.33
TNFRSF11AQ9Y6Q6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC23.37■■□□□ 1.33
TNFRSF11AQ9Y6Q6 AC005363.2-201ENST00000618631 242 ntBASIC23.37■■□□□ 1.33
TNFRSF11AQ9Y6Q6 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
TNFRSF11AQ9Y6Q6 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TNFRSF11AQ9Y6Q6 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
TNFRSF11AQ9Y6Q6 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TNFRSF11AQ9Y6Q6 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TNFRSF11AQ9Y6Q6 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TNFRSF11AQ9Y6Q6 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
TNFRSF11AQ9Y6Q6 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC23.36■■□□□ 1.33
TNFRSF11AQ9Y6Q6 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC23.36■■□□□ 1.33
TNFRSF11AQ9Y6Q6 FEM1AP3-201ENST00000403722 1741 ntBASIC23.36■■□□□ 1.33
TNFRSF11AQ9Y6Q6 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TNFRSF11AQ9Y6Q6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TNFRSF11AQ9Y6Q6 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC23.36■■□□□ 1.33
TNFRSF11AQ9Y6Q6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC23.36■■□□□ 1.33
TNFRSF11AQ9Y6Q6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
TNFRSF11AQ9Y6Q6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TNFRSF11AQ9Y6Q6 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TNFRSF11AQ9Y6Q6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC23.36■■□□□ 1.33
TNFRSF11AQ9Y6Q6 TK2-213ENST00000563369 882 ntTSL 5 BASIC23.36■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms