Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB1Q9Y5F3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB1Q9Y5F3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB1Q9Y5F3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB1Q9Y5F3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB1Q9Y5F3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB1Q9Y5F3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PCDHB1Q9Y5F3 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.11■□□□□ 0.65
PCDHB1Q9Y5F3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB1Q9Y5F3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHB1Q9Y5F3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB1Q9Y5F3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB1Q9Y5F3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDHB1Q9Y5F3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.11■□□□□ 0.65
PCDHB1Q9Y5F3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB1Q9Y5F3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB1Q9Y5F3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB1Q9Y5F3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB1Q9Y5F3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDHB1Q9Y5F3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB1Q9Y5F3 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB1Q9Y5F3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB1Q9Y5F3 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
PCDHB1Q9Y5F3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDHB1Q9Y5F3 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PCDHB1Q9Y5F3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB1Q9Y5F3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB1Q9Y5F3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB1Q9Y5F3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHB1Q9Y5F3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB1Q9Y5F3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB1Q9Y5F3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
PCDHB1Q9Y5F3 BX323043.1-201ENST00000641006 1765 ntBASIC19.11■□□□□ 0.65
PCDHB1Q9Y5F3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB1Q9Y5F3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.11■□□□□ 0.65
PCDHB1Q9Y5F3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB1Q9Y5F3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB1Q9Y5F3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB1Q9Y5F3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB1Q9Y5F3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PCDHB1Q9Y5F3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB1Q9Y5F3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB1Q9Y5F3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDHB1Q9Y5F3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB1Q9Y5F3 KRT18P22-201ENST00000402024 1347 ntBASIC19.1■□□□□ 0.65
PCDHB1Q9Y5F3 AC141586.3-201ENST00000562166 1838 ntBASIC19.1■□□□□ 0.65
PCDHB1Q9Y5F3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
PCDHB1Q9Y5F3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB1Q9Y5F3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB1Q9Y5F3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB1Q9Y5F3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB1Q9Y5F3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB1Q9Y5F3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.1■□□□□ 0.65
PCDHB1Q9Y5F3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB1Q9Y5F3 FITM1-202ENST00000559294 800 ntBASIC19.1■□□□□ 0.65
PCDHB1Q9Y5F3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.1■□□□□ 0.65
PCDHB1Q9Y5F3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.1■□□□□ 0.65
PCDHB1Q9Y5F3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB1Q9Y5F3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.1■□□□□ 0.65
PCDHB1Q9Y5F3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB1Q9Y5F3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB1Q9Y5F3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.1■□□□□ 0.65
PCDHB1Q9Y5F3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB1Q9Y5F3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDHB1Q9Y5F3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDHB1Q9Y5F3 SDHAP1-207ENST00000440850 2000 ntBASIC19.1■□□□□ 0.65
PCDHB1Q9Y5F3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
PCDHB1Q9Y5F3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB1Q9Y5F3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB1Q9Y5F3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB1Q9Y5F3 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB1Q9Y5F3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB1Q9Y5F3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PCDHB1Q9Y5F3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB1Q9Y5F3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
PCDHB1Q9Y5F3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHB1Q9Y5F3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB1Q9Y5F3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.09■□□□□ 0.65
PCDHB1Q9Y5F3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB1Q9Y5F3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB1Q9Y5F3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.09■□□□□ 0.65
PCDHB1Q9Y5F3 SLC25A3P1-201ENST00000443844 931 ntBASIC19.09■□□□□ 0.65
PCDHB1Q9Y5F3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB1Q9Y5F3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB1Q9Y5F3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.09■□□□□ 0.65
PCDHB1Q9Y5F3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.09■□□□□ 0.65
PCDHB1Q9Y5F3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHB1Q9Y5F3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PCDHB1Q9Y5F3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB1Q9Y5F3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHB1Q9Y5F3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB1Q9Y5F3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB1Q9Y5F3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB1Q9Y5F3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHB1Q9Y5F3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB1Q9Y5F3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHB1Q9Y5F3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHB1Q9Y5F3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB1Q9Y5F3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.08■□□□□ 0.65
PCDHB1Q9Y5F3 AC073508.3-201ENST00000619697 1419 ntBASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms