Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB11Q9Y5F2 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB11Q9Y5F2 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.72■□□□□ 0.59
PCDHB11Q9Y5F2 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
PCDHB11Q9Y5F2 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB11Q9Y5F2 SLC25A3P1-201ENST00000443844 931 ntBASIC18.72■□□□□ 0.59
PCDHB11Q9Y5F2 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDHB11Q9Y5F2 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHB11Q9Y5F2 C2orf69P3-201ENST00000565542 1120 ntBASIC18.72■□□□□ 0.59
PCDHB11Q9Y5F2 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDHB11Q9Y5F2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB11Q9Y5F2 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB11Q9Y5F2 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB11Q9Y5F2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB11Q9Y5F2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHB11Q9Y5F2 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PCDHB11Q9Y5F2 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PCDHB11Q9Y5F2 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB11Q9Y5F2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB11Q9Y5F2 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHB11Q9Y5F2 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB11Q9Y5F2 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB11Q9Y5F2 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PCDHB11Q9Y5F2 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PCDHB11Q9Y5F2 CYP2D8P-201ENST00000433633 1490 ntBASIC18.71■□□□□ 0.59
PCDHB11Q9Y5F2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHB11Q9Y5F2 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB11Q9Y5F2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB11Q9Y5F2 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB11Q9Y5F2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB11Q9Y5F2 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHB11Q9Y5F2 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB11Q9Y5F2 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB11Q9Y5F2 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHB11Q9Y5F2 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB11Q9Y5F2 AC010947.1-201ENST00000623454 693 ntBASIC18.71■□□□□ 0.59
PCDHB11Q9Y5F2 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB11Q9Y5F2 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHB11Q9Y5F2 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB11Q9Y5F2 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB11Q9Y5F2 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
PCDHB11Q9Y5F2 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB11Q9Y5F2 ZNF815P-204ENST00000434898 1737 ntBASIC18.71■□□□□ 0.59
PCDHB11Q9Y5F2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB11Q9Y5F2 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB11Q9Y5F2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PCDHB11Q9Y5F2 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.58
PCDHB11Q9Y5F2 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
PCDHB11Q9Y5F2 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB11Q9Y5F2 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHB11Q9Y5F2 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB11Q9Y5F2 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB11Q9Y5F2 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB11Q9Y5F2 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB11Q9Y5F2 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHB11Q9Y5F2 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.7■□□□□ 0.58
PCDHB11Q9Y5F2 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PCDHB11Q9Y5F2 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB11Q9Y5F2 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHB11Q9Y5F2 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB11Q9Y5F2 AC131212.4-201ENST00000623606 975 ntBASIC18.7■□□□□ 0.58
PCDHB11Q9Y5F2 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDHB11Q9Y5F2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB11Q9Y5F2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHB11Q9Y5F2 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHB11Q9Y5F2 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PCDHB11Q9Y5F2 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB11Q9Y5F2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHB11Q9Y5F2 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB11Q9Y5F2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB11Q9Y5F2 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
PCDHB11Q9Y5F2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB11Q9Y5F2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHB11Q9Y5F2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB11Q9Y5F2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB11Q9Y5F2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB11Q9Y5F2 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB11Q9Y5F2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB11Q9Y5F2 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
PCDHB11Q9Y5F2 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB11Q9Y5F2 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB11Q9Y5F2 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHB11Q9Y5F2 AC087388.1-201ENST00000571370 1112 ntBASIC18.69■□□□□ 0.58
PCDHB11Q9Y5F2 DGCR10-201ENST00000609839 495 ntBASIC18.69■□□□□ 0.58
PCDHB11Q9Y5F2 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.69■□□□□ 0.58
PCDHB11Q9Y5F2 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB11Q9Y5F2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
PCDHB11Q9Y5F2 AC098818.2-201ENST00000564925 2320 ntBASIC18.69■□□□□ 0.58
PCDHB11Q9Y5F2 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB11Q9Y5F2 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB11Q9Y5F2 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB11Q9Y5F2 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB11Q9Y5F2 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB11Q9Y5F2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB11Q9Y5F2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB11Q9Y5F2 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB11Q9Y5F2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDHB11Q9Y5F2 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
PCDHB11Q9Y5F2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PCDHB11Q9Y5F2 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms