Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GTF3C4Q9UKN8 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.57■□□□□ 0.88
GTF3C4Q9UKN8 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.57■□□□□ 0.88
GTF3C4Q9UKN8 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.57■□□□□ 0.88
GTF3C4Q9UKN8 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.57■□□□□ 0.88
GTF3C4Q9UKN8 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.57■□□□□ 0.88
GTF3C4Q9UKN8 AC008040.2-201ENST00000461049 708 ntBASIC20.57■□□□□ 0.88
GTF3C4Q9UKN8 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GTF3C4Q9UKN8 RCC2P6-201ENST00000526625 1557 ntBASIC20.57■□□□□ 0.88
GTF3C4Q9UKN8 AL160286.2-201ENST00000567150 934 ntBASIC20.57■□□□□ 0.88
GTF3C4Q9UKN8 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.57■□□□□ 0.88
GTF3C4Q9UKN8 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GTF3C4Q9UKN8 AC130371.2-201ENST00000619443 611 ntBASIC20.57■□□□□ 0.88
GTF3C4Q9UKN8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GTF3C4Q9UKN8 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GTF3C4Q9UKN8 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
GTF3C4Q9UKN8 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GTF3C4Q9UKN8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GTF3C4Q9UKN8 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
GTF3C4Q9UKN8 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GTF3C4Q9UKN8 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
GTF3C4Q9UKN8 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GTF3C4Q9UKN8 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GTF3C4Q9UKN8 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GTF3C4Q9UKN8 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GTF3C4Q9UKN8 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
GTF3C4Q9UKN8 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
GTF3C4Q9UKN8 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.56■□□□□ 0.88
GTF3C4Q9UKN8 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.56■□□□□ 0.88
GTF3C4Q9UKN8 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
GTF3C4Q9UKN8 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GTF3C4Q9UKN8 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GTF3C4Q9UKN8 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GTF3C4Q9UKN8 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.56■□□□□ 0.88
GTF3C4Q9UKN8 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.56■□□□□ 0.88
GTF3C4Q9UKN8 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
GTF3C4Q9UKN8 Z85996.1-201ENST00000494644 937 ntBASIC20.56■□□□□ 0.88
GTF3C4Q9UKN8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.56■□□□□ 0.88
GTF3C4Q9UKN8 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.56■□□□□ 0.88
GTF3C4Q9UKN8 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.56■□□□□ 0.88
GTF3C4Q9UKN8 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
GTF3C4Q9UKN8 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.56■□□□□ 0.88
GTF3C4Q9UKN8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
GTF3C4Q9UKN8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
GTF3C4Q9UKN8 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
GTF3C4Q9UKN8 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GTF3C4Q9UKN8 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
GTF3C4Q9UKN8 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.56■□□□□ 0.88
GTF3C4Q9UKN8 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GTF3C4Q9UKN8 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.56■□□□□ 0.88
GTF3C4Q9UKN8 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GTF3C4Q9UKN8 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
GTF3C4Q9UKN8 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GTF3C4Q9UKN8 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
GTF3C4Q9UKN8 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GTF3C4Q9UKN8 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GTF3C4Q9UKN8 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
GTF3C4Q9UKN8 AC004951.3-201ENST00000418645 1148 ntBASIC20.55■□□□□ 0.88
GTF3C4Q9UKN8 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GTF3C4Q9UKN8 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.55■□□□□ 0.88
GTF3C4Q9UKN8 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.55■□□□□ 0.88
GTF3C4Q9UKN8 FITM1-202ENST00000559294 800 ntBASIC20.55■□□□□ 0.88
GTF3C4Q9UKN8 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
GTF3C4Q9UKN8 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.55■□□□□ 0.88
GTF3C4Q9UKN8 LINC01023-201ENST00000606054 436 ntBASIC20.55■□□□□ 0.88
GTF3C4Q9UKN8 AC011298.2-201ENST00000617989 482 ntBASIC20.55■□□□□ 0.88
GTF3C4Q9UKN8 AL020996.1-203ENST00000536896 2307 ntBASIC20.55■□□□□ 0.88
GTF3C4Q9UKN8 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.55■□□□□ 0.88
GTF3C4Q9UKN8 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GTF3C4Q9UKN8 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.55■□□□□ 0.88
GTF3C4Q9UKN8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
GTF3C4Q9UKN8 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
GTF3C4Q9UKN8 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GTF3C4Q9UKN8 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.55■□□□□ 0.88
GTF3C4Q9UKN8 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GTF3C4Q9UKN8 TEX21P-204ENST00000641479 1693 ntBASIC20.54■□□□□ 0.88
GTF3C4Q9UKN8 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.54■□□□□ 0.88
GTF3C4Q9UKN8 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GTF3C4Q9UKN8 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GTF3C4Q9UKN8 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GTF3C4Q9UKN8 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.54■□□□□ 0.88
GTF3C4Q9UKN8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GTF3C4Q9UKN8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GTF3C4Q9UKN8 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GTF3C4Q9UKN8 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GTF3C4Q9UKN8 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
GTF3C4Q9UKN8 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GTF3C4Q9UKN8 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.54■□□□□ 0.88
GTF3C4Q9UKN8 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.54■□□□□ 0.88
GTF3C4Q9UKN8 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
GTF3C4Q9UKN8 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.54■□□□□ 0.88
GTF3C4Q9UKN8 AC141586.3-201ENST00000562166 1838 ntBASIC20.54■□□□□ 0.88
GTF3C4Q9UKN8 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GTF3C4Q9UKN8 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GTF3C4Q9UKN8 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GTF3C4Q9UKN8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GTF3C4Q9UKN8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
GTF3C4Q9UKN8 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
GTF3C4Q9UKN8 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GTF3C4Q9UKN8 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms