Protein–RNA interactions for Protein: Q9UJ41

RABGEF1, Rab5 GDP/GTP exchange factor, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABGEF1Q9UJ41 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RABGEF1Q9UJ41 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RABGEF1Q9UJ41 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
RABGEF1Q9UJ41 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RABGEF1Q9UJ41 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RABGEF1Q9UJ41 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RABGEF1Q9UJ41 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
RABGEF1Q9UJ41 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.6■□□□□ 0.73
RABGEF1Q9UJ41 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RABGEF1Q9UJ41 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RABGEF1Q9UJ41 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.6■□□□□ 0.73
RABGEF1Q9UJ41 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RABGEF1Q9UJ41 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
RABGEF1Q9UJ41 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.6■□□□□ 0.73
RABGEF1Q9UJ41 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RABGEF1Q9UJ41 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RABGEF1Q9UJ41 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.6■□□□□ 0.73
RABGEF1Q9UJ41 AC239809.2-201ENST00000415381 517 ntBASIC19.6■□□□□ 0.73
RABGEF1Q9UJ41 AC133681.1-201ENST00000465482 601 ntBASIC19.6■□□□□ 0.73
RABGEF1Q9UJ41 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.6■□□□□ 0.73
RABGEF1Q9UJ41 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
RABGEF1Q9UJ41 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
RABGEF1Q9UJ41 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RABGEF1Q9UJ41 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RABGEF1Q9UJ41 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.6■□□□□ 0.73
RABGEF1Q9UJ41 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
RABGEF1Q9UJ41 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RABGEF1Q9UJ41 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RABGEF1Q9UJ41 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RABGEF1Q9UJ41 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.59■□□□□ 0.73
RABGEF1Q9UJ41 AC104581.1-202ENST00000635932 2618 ntBASIC19.59■□□□□ 0.73
RABGEF1Q9UJ41 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.59■□□□□ 0.73
RABGEF1Q9UJ41 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RABGEF1Q9UJ41 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RABGEF1Q9UJ41 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RABGEF1Q9UJ41 KRASP1-201ENST00000407852 552 ntBASIC19.59■□□□□ 0.73
RABGEF1Q9UJ41 AL390719.1-204ENST00000412397 1219 ntBASIC19.59■□□□□ 0.73
RABGEF1Q9UJ41 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.59■□□□□ 0.73
RABGEF1Q9UJ41 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.59■□□□□ 0.73
RABGEF1Q9UJ41 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RABGEF1Q9UJ41 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.59■□□□□ 0.73
RABGEF1Q9UJ41 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.59■□□□□ 0.73
RABGEF1Q9UJ41 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.59■□□□□ 0.73
RABGEF1Q9UJ41 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RABGEF1Q9UJ41 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
RABGEF1Q9UJ41 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
RABGEF1Q9UJ41 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.58■□□□□ 0.73
RABGEF1Q9UJ41 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RABGEF1Q9UJ41 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
RABGEF1Q9UJ41 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.58■□□□□ 0.73
RABGEF1Q9UJ41 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RABGEF1Q9UJ41 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
RABGEF1Q9UJ41 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RABGEF1Q9UJ41 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
RABGEF1Q9UJ41 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
RABGEF1Q9UJ41 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RABGEF1Q9UJ41 RPS2P55-201ENST00000397318 883 ntBASIC19.58■□□□□ 0.72
RABGEF1Q9UJ41 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RABGEF1Q9UJ41 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.58■□□□□ 0.72
RABGEF1Q9UJ41 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.58■□□□□ 0.72
RABGEF1Q9UJ41 AC107956.1-201ENST00000494359 873 ntBASIC19.58■□□□□ 0.72
RABGEF1Q9UJ41 AC233702.5-201ENST00000584107 538 ntBASIC19.58■□□□□ 0.72
RABGEF1Q9UJ41 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
RABGEF1Q9UJ41 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
RABGEF1Q9UJ41 AC009113.1-201ENST00000570267 2443 ntBASIC19.58■□□□□ 0.72
RABGEF1Q9UJ41 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RABGEF1Q9UJ41 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RABGEF1Q9UJ41 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RABGEF1Q9UJ41 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.58■□□□□ 0.72
RABGEF1Q9UJ41 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RABGEF1Q9UJ41 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RABGEF1Q9UJ41 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.58■□□□□ 0.72
RABGEF1Q9UJ41 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RABGEF1Q9UJ41 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.57■□□□□ 0.72
RABGEF1Q9UJ41 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RABGEF1Q9UJ41 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RABGEF1Q9UJ41 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RABGEF1Q9UJ41 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
RABGEF1Q9UJ41 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.57■□□□□ 0.72
RABGEF1Q9UJ41 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.57■□□□□ 0.72
RABGEF1Q9UJ41 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RABGEF1Q9UJ41 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.57■□□□□ 0.72
RABGEF1Q9UJ41 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RABGEF1Q9UJ41 AC012618.2-201ENST00000428058 849 ntBASIC19.57■□□□□ 0.72
RABGEF1Q9UJ41 TSPY7P-201ENST00000431358 1114 ntBASIC19.57■□□□□ 0.72
RABGEF1Q9UJ41 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.57■□□□□ 0.72
RABGEF1Q9UJ41 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.57■□□□□ 0.72
RABGEF1Q9UJ41 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.57■□□□□ 0.72
RABGEF1Q9UJ41 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.57■□□□□ 0.72
RABGEF1Q9UJ41 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.57■□□□□ 0.72
RABGEF1Q9UJ41 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.57■□□□□ 0.72
RABGEF1Q9UJ41 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.57■□□□□ 0.72
RABGEF1Q9UJ41 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.57■□□□□ 0.72
RABGEF1Q9UJ41 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RABGEF1Q9UJ41 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RABGEF1Q9UJ41 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.57■□□□□ 0.72
RABGEF1Q9UJ41 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
RABGEF1Q9UJ41 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RABGEF1Q9UJ41 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RABGEF1Q9UJ41 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms