Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 AL121832.2-201ENST00000610979 668 ntBASIC20.13■□□□□ 0.81
SMARCAL1Q9NZC9 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.13■□□□□ 0.81
SMARCAL1Q9NZC9 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.13■□□□□ 0.81
SMARCAL1Q9NZC9 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMARCAL1Q9NZC9 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.13■□□□□ 0.81
SMARCAL1Q9NZC9 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMARCAL1Q9NZC9 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SMARCAL1Q9NZC9 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SMARCAL1Q9NZC9 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SMARCAL1Q9NZC9 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.13■□□□□ 0.81
SMARCAL1Q9NZC9 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMARCAL1Q9NZC9 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMARCAL1Q9NZC9 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMARCAL1Q9NZC9 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.12■□□□□ 0.81
SMARCAL1Q9NZC9 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCAL1Q9NZC9 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.12■□□□□ 0.81
SMARCAL1Q9NZC9 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SMARCAL1Q9NZC9 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCAL1Q9NZC9 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SMARCAL1Q9NZC9 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.12■□□□□ 0.81
SMARCAL1Q9NZC9 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCAL1Q9NZC9 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SMARCAL1Q9NZC9 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.12■□□□□ 0.81
SMARCAL1Q9NZC9 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.12■□□□□ 0.81
SMARCAL1Q9NZC9 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.12■□□□□ 0.81
SMARCAL1Q9NZC9 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SMARCAL1Q9NZC9 AC006557.6-201ENST00000623071 864 ntBASIC20.12■□□□□ 0.81
SMARCAL1Q9NZC9 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SMARCAL1Q9NZC9 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCAL1Q9NZC9 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SMARCAL1Q9NZC9 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.12■□□□□ 0.81
SMARCAL1Q9NZC9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.12■□□□□ 0.81
SMARCAL1Q9NZC9 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCAL1Q9NZC9 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCAL1Q9NZC9 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.12■□□□□ 0.81
SMARCAL1Q9NZC9 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SMARCAL1Q9NZC9 AC067852.2-201ENST00000590513 2313 ntBASIC20.11■□□□□ 0.81
SMARCAL1Q9NZC9 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
SMARCAL1Q9NZC9 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.11■□□□□ 0.81
SMARCAL1Q9NZC9 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.11■□□□□ 0.81
SMARCAL1Q9NZC9 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
SMARCAL1Q9NZC9 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCAL1Q9NZC9 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SMARCAL1Q9NZC9 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
SMARCAL1Q9NZC9 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.81
SMARCAL1Q9NZC9 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCAL1Q9NZC9 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.11■□□□□ 0.81
SMARCAL1Q9NZC9 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.11■□□□□ 0.81
SMARCAL1Q9NZC9 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.11■□□□□ 0.81
SMARCAL1Q9NZC9 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.11■□□□□ 0.81
SMARCAL1Q9NZC9 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.11■□□□□ 0.81
SMARCAL1Q9NZC9 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCAL1Q9NZC9 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCAL1Q9NZC9 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCAL1Q9NZC9 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCAL1Q9NZC9 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SMARCAL1Q9NZC9 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCAL1Q9NZC9 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMARCAL1Q9NZC9 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.1■□□□□ 0.81
SMARCAL1Q9NZC9 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMARCAL1Q9NZC9 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMARCAL1Q9NZC9 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMARCAL1Q9NZC9 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMARCAL1Q9NZC9 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMARCAL1Q9NZC9 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMARCAL1Q9NZC9 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMARCAL1Q9NZC9 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
SMARCAL1Q9NZC9 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SMARCAL1Q9NZC9 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMARCAL1Q9NZC9 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SMARCAL1Q9NZC9 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.1■□□□□ 0.81
SMARCAL1Q9NZC9 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.1■□□□□ 0.81
SMARCAL1Q9NZC9 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
SMARCAL1Q9NZC9 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SMARCAL1Q9NZC9 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.1■□□□□ 0.81
SMARCAL1Q9NZC9 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
SMARCAL1Q9NZC9 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.1■□□□□ 0.81
SMARCAL1Q9NZC9 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.1■□□□□ 0.81
SMARCAL1Q9NZC9 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SMARCAL1Q9NZC9 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.1■□□□□ 0.81
SMARCAL1Q9NZC9 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SMARCAL1Q9NZC9 ANO7L1-203ENST00000602586 1720 ntBASIC20.1■□□□□ 0.81
SMARCAL1Q9NZC9 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMARCAL1Q9NZC9 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMARCAL1Q9NZC9 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.1■□□□□ 0.81
SMARCAL1Q9NZC9 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SMARCAL1Q9NZC9 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SMARCAL1Q9NZC9 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.09■□□□□ 0.81
SMARCAL1Q9NZC9 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMARCAL1Q9NZC9 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
SMARCAL1Q9NZC9 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMARCAL1Q9NZC9 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMARCAL1Q9NZC9 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SMARCAL1Q9NZC9 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SMARCAL1Q9NZC9 NCF1B-203ENST00000435988 1254 ntBASIC20.09■□□□□ 0.81
SMARCAL1Q9NZC9 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.09■□□□□ 0.81
SMARCAL1Q9NZC9 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.09■□□□□ 0.81
SMARCAL1Q9NZC9 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.09■□□□□ 0.81
SMARCAL1Q9NZC9 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
SMARCAL1Q9NZC9 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms