Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
BLOC1S4Q9NUP1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.27■■□□□ 1
BLOC1S4Q9NUP1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.27■■□□□ 1
BLOC1S4Q9NUP1 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.27■■□□□ 1
BLOC1S4Q9NUP1 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BLOC1S4Q9NUP1 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
BLOC1S4Q9NUP1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BLOC1S4Q9NUP1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BLOC1S4Q9NUP1 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.27■■□□□ 1
BLOC1S4Q9NUP1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BLOC1S4Q9NUP1 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
BLOC1S4Q9NUP1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
BLOC1S4Q9NUP1 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.27■■□□□ 1
BLOC1S4Q9NUP1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.27■■□□□ 1
BLOC1S4Q9NUP1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.27■■□□□ 1
BLOC1S4Q9NUP1 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
BLOC1S4Q9NUP1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.27■■□□□ 1
BLOC1S4Q9NUP1 AP000692.2-201ENST00000608391 879 ntBASIC21.27■■□□□ 1
BLOC1S4Q9NUP1 AP001412.1-201ENST00000608405 714 ntBASIC21.27■■□□□ 1
BLOC1S4Q9NUP1 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.27■■□□□ 1
BLOC1S4Q9NUP1 REXO1L10P-201ENST00000615707 1290 ntBASIC21.27■■□□□ 1
BLOC1S4Q9NUP1 REXO1L12P-201ENST00000622156 912 ntBASIC21.27■■□□□ 1
BLOC1S4Q9NUP1 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.27■■□□□ 1
BLOC1S4Q9NUP1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BLOC1S4Q9NUP1 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.27■■□□□ 1
BLOC1S4Q9NUP1 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.27■■□□□ 1
BLOC1S4Q9NUP1 CROCCP3-202ENST00000420820 1947 ntBASIC21.27■■□□□ 1
BLOC1S4Q9NUP1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
BLOC1S4Q9NUP1 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.26■□□□□ 0.99
BLOC1S4Q9NUP1 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
BLOC1S4Q9NUP1 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
BLOC1S4Q9NUP1 AC093503.3-201ENST00000624917 2352 ntBASIC21.26■□□□□ 0.99
BLOC1S4Q9NUP1 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BLOC1S4Q9NUP1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.26■□□□□ 0.99
BLOC1S4Q9NUP1 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BLOC1S4Q9NUP1 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.26■□□□□ 0.99
BLOC1S4Q9NUP1 PRSS44-201ENST00000515154 1146 ntBASIC21.26■□□□□ 0.99
BLOC1S4Q9NUP1 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
BLOC1S4Q9NUP1 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BLOC1S4Q9NUP1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BLOC1S4Q9NUP1 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BLOC1S4Q9NUP1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BLOC1S4Q9NUP1 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
BLOC1S4Q9NUP1 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BLOC1S4Q9NUP1 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.26■□□□□ 0.99
BLOC1S4Q9NUP1 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
BLOC1S4Q9NUP1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BLOC1S4Q9NUP1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
BLOC1S4Q9NUP1 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BLOC1S4Q9NUP1 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
BLOC1S4Q9NUP1 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BLOC1S4Q9NUP1 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BLOC1S4Q9NUP1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.25■□□□□ 0.99
BLOC1S4Q9NUP1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
BLOC1S4Q9NUP1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
BLOC1S4Q9NUP1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.25■□□□□ 0.99
BLOC1S4Q9NUP1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
BLOC1S4Q9NUP1 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
BLOC1S4Q9NUP1 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BLOC1S4Q9NUP1 TSPY7P-201ENST00000431358 1114 ntBASIC21.25■□□□□ 0.99
BLOC1S4Q9NUP1 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
BLOC1S4Q9NUP1 FAM207BP-201ENST00000447172 505 ntBASIC21.25■□□□□ 0.99
BLOC1S4Q9NUP1 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.25■□□□□ 0.99
BLOC1S4Q9NUP1 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.25■□□□□ 0.99
BLOC1S4Q9NUP1 CKBP1-201ENST00000565489 1086 ntBASIC21.25■□□□□ 0.99
BLOC1S4Q9NUP1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
BLOC1S4Q9NUP1 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
BLOC1S4Q9NUP1 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.25■□□□□ 0.99
BLOC1S4Q9NUP1 AC026471.5-201ENST00000615068 467 ntBASIC21.25■□□□□ 0.99
BLOC1S4Q9NUP1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BLOC1S4Q9NUP1 AC004408.2-201ENST00000623613 2777 ntBASIC21.25■□□□□ 0.99
BLOC1S4Q9NUP1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BLOC1S4Q9NUP1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.24■□□□□ 0.99
BLOC1S4Q9NUP1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
BLOC1S4Q9NUP1 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
BLOC1S4Q9NUP1 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BLOC1S4Q9NUP1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
BLOC1S4Q9NUP1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.24■□□□□ 0.99
BLOC1S4Q9NUP1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BLOC1S4Q9NUP1 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
BLOC1S4Q9NUP1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BLOC1S4Q9NUP1 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
BLOC1S4Q9NUP1 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.24■□□□□ 0.99
BLOC1S4Q9NUP1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.24■□□□□ 0.99
BLOC1S4Q9NUP1 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.24■□□□□ 0.99
BLOC1S4Q9NUP1 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.24■□□□□ 0.99
BLOC1S4Q9NUP1 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.24■□□□□ 0.99
BLOC1S4Q9NUP1 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.24■□□□□ 0.99
BLOC1S4Q9NUP1 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BLOC1S4Q9NUP1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BLOC1S4Q9NUP1 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BLOC1S4Q9NUP1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
BLOC1S4Q9NUP1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
BLOC1S4Q9NUP1 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BLOC1S4Q9NUP1 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.24■□□□□ 0.99
BLOC1S4Q9NUP1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
BLOC1S4Q9NUP1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.23■□□□□ 0.99
BLOC1S4Q9NUP1 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.23■□□□□ 0.99
BLOC1S4Q9NUP1 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
BLOC1S4Q9NUP1 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms