Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.27■□□□□ 0.84
TLR9Q9NR96 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
TLR9Q9NR96 RASA4DP-201ENST00000460726 1199 ntBASIC20.27■□□□□ 0.84
TLR9Q9NR96 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.27■□□□□ 0.84
TLR9Q9NR96 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.27■□□□□ 0.84
TLR9Q9NR96 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
TLR9Q9NR96 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TLR9Q9NR96 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TLR9Q9NR96 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.27■□□□□ 0.83
TLR9Q9NR96 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TLR9Q9NR96 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TLR9Q9NR96 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.26■□□□□ 0.83
TLR9Q9NR96 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TLR9Q9NR96 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TLR9Q9NR96 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TLR9Q9NR96 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TLR9Q9NR96 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TLR9Q9NR96 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TLR9Q9NR96 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TLR9Q9NR96 TSPY21P-201ENST00000433481 731 ntBASIC20.26■□□□□ 0.83
TLR9Q9NR96 TSPY23P-201ENST00000440136 739 ntBASIC20.26■□□□□ 0.83
TLR9Q9NR96 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.26■□□□□ 0.83
TLR9Q9NR96 PRELID1P1-202ENST00000567272 903 ntBASIC20.26■□□□□ 0.83
TLR9Q9NR96 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
TLR9Q9NR96 MIR3652-201ENST00000579335 131 ntBASIC20.26■□□□□ 0.83
TLR9Q9NR96 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TLR9Q9NR96 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TLR9Q9NR96 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TLR9Q9NR96 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TLR9Q9NR96 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TLR9Q9NR96 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TLR9Q9NR96 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TLR9Q9NR96 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.26■□□□□ 0.83
TLR9Q9NR96 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TLR9Q9NR96 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TLR9Q9NR96 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TLR9Q9NR96 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.25■□□□□ 0.83
TLR9Q9NR96 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TLR9Q9NR96 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TLR9Q9NR96 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.25■□□□□ 0.83
TLR9Q9NR96 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TLR9Q9NR96 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TLR9Q9NR96 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TLR9Q9NR96 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TLR9Q9NR96 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TLR9Q9NR96 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TLR9Q9NR96 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.25■□□□□ 0.83
TLR9Q9NR96 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TLR9Q9NR96 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.25■□□□□ 0.83
TLR9Q9NR96 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.25■□□□□ 0.83
TLR9Q9NR96 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TLR9Q9NR96 AC092329.2-201ENST00000598402 547 ntBASIC20.25■□□□□ 0.83
TLR9Q9NR96 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TLR9Q9NR96 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TLR9Q9NR96 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.25■□□□□ 0.83
TLR9Q9NR96 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TLR9Q9NR96 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TLR9Q9NR96 AC073314.1-201ENST00000568729 2216 ntBASIC20.25■□□□□ 0.83
TLR9Q9NR96 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TLR9Q9NR96 AL157384.1-201ENST00000445995 2473 ntBASIC20.24■□□□□ 0.83
TLR9Q9NR96 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TLR9Q9NR96 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TLR9Q9NR96 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TLR9Q9NR96 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TLR9Q9NR96 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.24■□□□□ 0.83
TLR9Q9NR96 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.24■□□□□ 0.83
TLR9Q9NR96 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TLR9Q9NR96 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.24■□□□□ 0.83
TLR9Q9NR96 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TLR9Q9NR96 AC092597.1-201ENST00000487352 616 ntBASIC20.24■□□□□ 0.83
TLR9Q9NR96 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
TLR9Q9NR96 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.24■□□□□ 0.83
TLR9Q9NR96 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TLR9Q9NR96 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.24■□□□□ 0.83
TLR9Q9NR96 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.24■□□□□ 0.83
TLR9Q9NR96 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.24■□□□□ 0.83
TLR9Q9NR96 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
TLR9Q9NR96 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TLR9Q9NR96 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TLR9Q9NR96 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.24■□□□□ 0.83
TLR9Q9NR96 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TLR9Q9NR96 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TLR9Q9NR96 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TLR9Q9NR96 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TLR9Q9NR96 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TLR9Q9NR96 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TLR9Q9NR96 AC092667.1-201ENST00000434301 2586 ntBASIC20.23■□□□□ 0.83
TLR9Q9NR96 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TLR9Q9NR96 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.23■□□□□ 0.83
TLR9Q9NR96 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TLR9Q9NR96 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
TLR9Q9NR96 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TLR9Q9NR96 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.23■□□□□ 0.83
TLR9Q9NR96 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TLR9Q9NR96 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TLR9Q9NR96 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
TLR9Q9NR96 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.23■□□□□ 0.83
TLR9Q9NR96 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TLR9Q9NR96 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.23■□□□□ 0.83
TLR9Q9NR96 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms