Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.34■□□□□ 0.21
GCM1Q9NP62 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
GCM1Q9NP62 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GCM1Q9NP62 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GCM1Q9NP62 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
GCM1Q9NP62 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GCM1Q9NP62 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
GCM1Q9NP62 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.34■□□□□ 0.21
GCM1Q9NP62 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
GCM1Q9NP62 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GCM1Q9NP62 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GCM1Q9NP62 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
GCM1Q9NP62 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
GCM1Q9NP62 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.33■□□□□ 0.21
GCM1Q9NP62 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.33■□□□□ 0.21
GCM1Q9NP62 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.33■□□□□ 0.21
GCM1Q9NP62 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
GCM1Q9NP62 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
GCM1Q9NP62 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.33■□□□□ 0.21
GCM1Q9NP62 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
GCM1Q9NP62 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
GCM1Q9NP62 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
GCM1Q9NP62 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GCM1Q9NP62 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
GCM1Q9NP62 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GCM1Q9NP62 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GCM1Q9NP62 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GCM1Q9NP62 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
GCM1Q9NP62 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.33■□□□□ 0.2
GCM1Q9NP62 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.33■□□□□ 0.2
GCM1Q9NP62 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.33■□□□□ 0.2
GCM1Q9NP62 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
GCM1Q9NP62 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
GCM1Q9NP62 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
GCM1Q9NP62 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GCM1Q9NP62 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GCM1Q9NP62 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GCM1Q9NP62 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.33■□□□□ 0.2
GCM1Q9NP62 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GCM1Q9NP62 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
GCM1Q9NP62 AC104417.2-201ENST00000562989 1793 ntBASIC16.33■□□□□ 0.2
GCM1Q9NP62 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GCM1Q9NP62 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
GCM1Q9NP62 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GCM1Q9NP62 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
GCM1Q9NP62 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GCM1Q9NP62 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GCM1Q9NP62 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GCM1Q9NP62 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GCM1Q9NP62 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GCM1Q9NP62 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
GCM1Q9NP62 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GCM1Q9NP62 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GCM1Q9NP62 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.32■□□□□ 0.2
GCM1Q9NP62 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
GCM1Q9NP62 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
GCM1Q9NP62 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
GCM1Q9NP62 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.32■□□□□ 0.2
GCM1Q9NP62 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.32■□□□□ 0.2
GCM1Q9NP62 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.32■□□□□ 0.2
GCM1Q9NP62 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.32■□□□□ 0.2
GCM1Q9NP62 AP003071.4-201ENST00000562276 1284 ntBASIC16.32■□□□□ 0.2
GCM1Q9NP62 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GCM1Q9NP62 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GCM1Q9NP62 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.32■□□□□ 0.2
GCM1Q9NP62 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.32■□□□□ 0.2
GCM1Q9NP62 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
GCM1Q9NP62 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.32■□□□□ 0.2
GCM1Q9NP62 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.31■□□□□ 0.2
GCM1Q9NP62 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.31■□□□□ 0.2
GCM1Q9NP62 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GCM1Q9NP62 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
GCM1Q9NP62 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
GCM1Q9NP62 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GCM1Q9NP62 AC007952.6-201ENST00000573168 2673 ntBASIC16.31■□□□□ 0.2
GCM1Q9NP62 AC003957.1-201ENST00000625108 2673 ntBASIC16.31■□□□□ 0.2
GCM1Q9NP62 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.31■□□□□ 0.2
GCM1Q9NP62 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.31■□□□□ 0.2
GCM1Q9NP62 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.31■□□□□ 0.2
GCM1Q9NP62 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.31■□□□□ 0.2
GCM1Q9NP62 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.31■□□□□ 0.2
GCM1Q9NP62 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
GCM1Q9NP62 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.31■□□□□ 0.2
GCM1Q9NP62 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.31■□□□□ 0.2
GCM1Q9NP62 HTR7P1-202ENST00000624664 4411 ntBASIC16.31■□□□□ 0.2
GCM1Q9NP62 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.31■□□□□ 0.2
GCM1Q9NP62 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.3■□□□□ 0.2
GCM1Q9NP62 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GCM1Q9NP62 FSCN1P1-201ENST00000568912 1481 ntBASIC16.3■□□□□ 0.2
GCM1Q9NP62 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
GCM1Q9NP62 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GCM1Q9NP62 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
GCM1Q9NP62 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GCM1Q9NP62 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GCM1Q9NP62 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.3■□□□□ 0.2
GCM1Q9NP62 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.3■□□□□ 0.2
GCM1Q9NP62 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
GCM1Q9NP62 Z85996.1-201ENST00000494644 937 ntBASIC16.3■□□□□ 0.2
GCM1Q9NP62 AC116562.2-201ENST00000507042 360 ntBASIC16.3■□□□□ 0.2
GCM1Q9NP62 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms