Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SCAF1Q9H7N4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SCAF1Q9H7N4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SCAF1Q9H7N4 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
SCAF1Q9H7N4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
SCAF1Q9H7N4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
SCAF1Q9H7N4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC28.41■■■□□ 2.14
SCAF1Q9H7N4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SCAF1Q9H7N4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SCAF1Q9H7N4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SCAF1Q9H7N4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SCAF1Q9H7N4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SCAF1Q9H7N4 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SCAF1Q9H7N4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC28.41■■■□□ 2.14
SCAF1Q9H7N4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
SCAF1Q9H7N4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC28.41■■■□□ 2.14
SCAF1Q9H7N4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
SCAF1Q9H7N4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC28.41■■■□□ 2.14
SCAF1Q9H7N4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC28.41■■■□□ 2.14
SCAF1Q9H7N4 AC012313.10-201ENST00000623509 926 ntBASIC28.41■■■□□ 2.14
SCAF1Q9H7N4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC28.4■■■□□ 2.14
SCAF1Q9H7N4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
SCAF1Q9H7N4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
SCAF1Q9H7N4 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
SCAF1Q9H7N4 PLK5-205ENST00000642079 1969 ntBASIC28.4■■■□□ 2.14
SCAF1Q9H7N4 IER3-202ENST00000376377 1350 ntBASIC28.4■■■□□ 2.14
SCAF1Q9H7N4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
SCAF1Q9H7N4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SCAF1Q9H7N4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC28.4■■■□□ 2.14
SCAF1Q9H7N4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC28.4■■■□□ 2.14
SCAF1Q9H7N4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
SCAF1Q9H7N4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
SCAF1Q9H7N4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC28.4■■■□□ 2.14
SCAF1Q9H7N4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC28.4■■■□□ 2.14
SCAF1Q9H7N4 PVRIG2P-201ENST00000435460 978 ntBASIC28.4■■■□□ 2.14
SCAF1Q9H7N4 F2R-202ENST00000505600 442 ntTSL 2 BASIC28.4■■■□□ 2.14
SCAF1Q9H7N4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
SCAF1Q9H7N4 C2orf69P3-201ENST00000565542 1120 ntBASIC28.4■■■□□ 2.14
SCAF1Q9H7N4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC28.4■■■□□ 2.14
SCAF1Q9H7N4 AC023511.2-201ENST00000618803 211 ntBASIC28.4■■■□□ 2.14
SCAF1Q9H7N4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
SCAF1Q9H7N4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC28.39■■■□□ 2.14
SCAF1Q9H7N4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
SCAF1Q9H7N4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
SCAF1Q9H7N4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
SCAF1Q9H7N4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC28.39■■■□□ 2.14
SCAF1Q9H7N4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
SCAF1Q9H7N4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
SCAF1Q9H7N4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
SCAF1Q9H7N4 AC020916.1-201ENST00000587762 1774 ntBASIC28.39■■■□□ 2.13
SCAF1Q9H7N4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC28.39■■■□□ 2.13
SCAF1Q9H7N4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC28.39■■■□□ 2.13
SCAF1Q9H7N4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.13
SCAF1Q9H7N4 FAM8A6P-201ENST00000407496 1135 ntBASIC28.39■■■□□ 2.13
SCAF1Q9H7N4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
SCAF1Q9H7N4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.13
SCAF1Q9H7N4 AC116562.2-201ENST00000507042 360 ntBASIC28.39■■■□□ 2.13
SCAF1Q9H7N4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC28.39■■■□□ 2.13
SCAF1Q9H7N4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.13
SCAF1Q9H7N4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC28.38■■■□□ 2.13
SCAF1Q9H7N4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC28.38■■■□□ 2.13
SCAF1Q9H7N4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SCAF1Q9H7N4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
SCAF1Q9H7N4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
SCAF1Q9H7N4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SCAF1Q9H7N4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC28.38■■■□□ 2.13
SCAF1Q9H7N4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC28.38■■■□□ 2.13
SCAF1Q9H7N4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC28.38■■■□□ 2.13
SCAF1Q9H7N4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SCAF1Q9H7N4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC28.38■■■□□ 2.13
SCAF1Q9H7N4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC28.38■■■□□ 2.13
SCAF1Q9H7N4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SCAF1Q9H7N4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC28.38■■■□□ 2.13
SCAF1Q9H7N4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SCAF1Q9H7N4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
SCAF1Q9H7N4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC28.38■■■□□ 2.13
SCAF1Q9H7N4 AC092647.4-201ENST00000457211 535 ntBASIC28.38■■■□□ 2.13
SCAF1Q9H7N4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
SCAF1Q9H7N4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC28.38■■■□□ 2.13
SCAF1Q9H7N4 AL121906.2-201ENST00000621597 723 ntBASIC28.38■■■□□ 2.13
SCAF1Q9H7N4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC28.38■■■□□ 2.13
SCAF1Q9H7N4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
SCAF1Q9H7N4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SCAF1Q9H7N4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC28.38■■■□□ 2.13
SCAF1Q9H7N4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC28.37■■■□□ 2.13
SCAF1Q9H7N4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
SCAF1Q9H7N4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SCAF1Q9H7N4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC28.37■■■□□ 2.13
SCAF1Q9H7N4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC28.37■■■□□ 2.13
SCAF1Q9H7N4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC28.37■■■□□ 2.13
SCAF1Q9H7N4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SCAF1Q9H7N4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SCAF1Q9H7N4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
SCAF1Q9H7N4 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
SCAF1Q9H7N4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
SCAF1Q9H7N4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC28.37■■■□□ 2.13
SCAF1Q9H7N4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
SCAF1Q9H7N4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC28.37■■■□□ 2.13
SCAF1Q9H7N4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC28.37■■■□□ 2.13
SCAF1Q9H7N4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC28.37■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms