Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VRK1Q99986 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
VRK1Q99986 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.85■□□□□ 0.29
VRK1Q99986 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VRK1Q99986 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
VRK1Q99986 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VRK1Q99986 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VRK1Q99986 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
VRK1Q99986 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
VRK1Q99986 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VRK1Q99986 AL353807.1-201ENST00000427475 662 ntBASIC16.85■□□□□ 0.29
VRK1Q99986 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VRK1Q99986 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.85■□□□□ 0.29
VRK1Q99986 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.85■□□□□ 0.29
VRK1Q99986 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
VRK1Q99986 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.85■□□□□ 0.29
VRK1Q99986 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.85■□□□□ 0.29
VRK1Q99986 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VRK1Q99986 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.85■□□□□ 0.29
VRK1Q99986 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VRK1Q99986 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VRK1Q99986 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VRK1Q99986 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.85■□□□□ 0.29
VRK1Q99986 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.85■□□□□ 0.29
VRK1Q99986 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
VRK1Q99986 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.85■□□□□ 0.29
VRK1Q99986 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
VRK1Q99986 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VRK1Q99986 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.85■□□□□ 0.29
VRK1Q99986 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VRK1Q99986 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VRK1Q99986 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VRK1Q99986 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VRK1Q99986 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.84■□□□□ 0.29
VRK1Q99986 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VRK1Q99986 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.84■□□□□ 0.29
VRK1Q99986 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VRK1Q99986 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.84■□□□□ 0.29
VRK1Q99986 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.84■□□□□ 0.29
VRK1Q99986 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.84■□□□□ 0.29
VRK1Q99986 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VRK1Q99986 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VRK1Q99986 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VRK1Q99986 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VRK1Q99986 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VRK1Q99986 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.84■□□□□ 0.29
VRK1Q99986 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VRK1Q99986 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.84■□□□□ 0.29
VRK1Q99986 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VRK1Q99986 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.84■□□□□ 0.29
VRK1Q99986 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VRK1Q99986 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VRK1Q99986 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VRK1Q99986 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VRK1Q99986 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
VRK1Q99986 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VRK1Q99986 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.84■□□□□ 0.29
VRK1Q99986 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VRK1Q99986 AP002982.1-201ENST00000492365 877 ntBASIC16.84■□□□□ 0.29
VRK1Q99986 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.84■□□□□ 0.29
VRK1Q99986 AF186192.3-201ENST00000583427 947 ntBASIC16.84■□□□□ 0.29
VRK1Q99986 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.84■□□□□ 0.29
VRK1Q99986 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.84■□□□□ 0.29
VRK1Q99986 REXO1L12P-201ENST00000622156 912 ntBASIC16.84■□□□□ 0.29
VRK1Q99986 AC073912.3-201ENST00000624414 853 ntBASIC16.84■□□□□ 0.29
VRK1Q99986 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VRK1Q99986 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
VRK1Q99986 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VRK1Q99986 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VRK1Q99986 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VRK1Q99986 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VRK1Q99986 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VRK1Q99986 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
VRK1Q99986 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.84■□□□□ 0.29
VRK1Q99986 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.84■□□□□ 0.29
VRK1Q99986 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VRK1Q99986 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
VRK1Q99986 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
VRK1Q99986 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.83■□□□□ 0.29
VRK1Q99986 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
VRK1Q99986 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
VRK1Q99986 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
VRK1Q99986 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
VRK1Q99986 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VRK1Q99986 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
VRK1Q99986 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
VRK1Q99986 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VRK1Q99986 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VRK1Q99986 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.83■□□□□ 0.28
VRK1Q99986 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.83■□□□□ 0.28
VRK1Q99986 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VRK1Q99986 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.83■□□□□ 0.28
VRK1Q99986 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VRK1Q99986 AL355355.2-201ENST00000442321 338 ntBASIC16.83■□□□□ 0.28
VRK1Q99986 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VRK1Q99986 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VRK1Q99986 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.83■□□□□ 0.28
VRK1Q99986 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.83■□□□□ 0.28
VRK1Q99986 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.83■□□□□ 0.28
VRK1Q99986 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms