Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCC1Q96S66 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCC1Q96S66 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCC1Q96S66 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCC1Q96S66 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLCC1Q96S66 AL512625.2-201ENST00000417533 625 ntBASIC16.07■□□□□ 0.16
CLCC1Q96S66 BX276092.2-201ENST00000417668 665 ntBASIC16.07■□□□□ 0.16
CLCC1Q96S66 AC083906.2-201ENST00000511578 360 ntBASIC16.07■□□□□ 0.16
CLCC1Q96S66 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.07■□□□□ 0.16
CLCC1Q96S66 AC133552.2-202ENST00000575694 574 ntBASIC16.07■□□□□ 0.16
CLCC1Q96S66 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.07■□□□□ 0.16
CLCC1Q96S66 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.07■□□□□ 0.16
CLCC1Q96S66 RAP2CP1-201ENST00000605103 478 ntBASIC16.07■□□□□ 0.16
CLCC1Q96S66 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLCC1Q96S66 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCC1Q96S66 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLCC1Q96S66 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCC1Q96S66 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.07■□□□□ 0.16
CLCC1Q96S66 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCC1Q96S66 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLCC1Q96S66 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCC1Q96S66 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCC1Q96S66 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCC1Q96S66 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCC1Q96S66 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
CLCC1Q96S66 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCC1Q96S66 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CLCC1Q96S66 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CLCC1Q96S66 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.06■□□□□ 0.16
CLCC1Q96S66 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCC1Q96S66 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.06■□□□□ 0.16
CLCC1Q96S66 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCC1Q96S66 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CLCC1Q96S66 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
CLCC1Q96S66 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.06■□□□□ 0.16
CLCC1Q96S66 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.06■□□□□ 0.16
CLCC1Q96S66 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLCC1Q96S66 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
CLCC1Q96S66 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.06■□□□□ 0.16
CLCC1Q96S66 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLCC1Q96S66 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCC1Q96S66 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.06■□□□□ 0.16
CLCC1Q96S66 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.06■□□□□ 0.16
CLCC1Q96S66 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.06■□□□□ 0.16
CLCC1Q96S66 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.06■□□□□ 0.16
CLCC1Q96S66 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.06■□□□□ 0.16
CLCC1Q96S66 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.06■□□□□ 0.16
CLCC1Q96S66 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CLCC1Q96S66 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.06■□□□□ 0.16
CLCC1Q96S66 AL121832.2-201ENST00000610979 668 ntBASIC16.06■□□□□ 0.16
CLCC1Q96S66 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.06■□□□□ 0.16
CLCC1Q96S66 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CLCC1Q96S66 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLCC1Q96S66 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCC1Q96S66 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLCC1Q96S66 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCC1Q96S66 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCC1Q96S66 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.05■□□□□ 0.16
CLCC1Q96S66 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCC1Q96S66 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCC1Q96S66 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCC1Q96S66 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CLCC1Q96S66 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCC1Q96S66 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.05■□□□□ 0.16
CLCC1Q96S66 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.05■□□□□ 0.16
CLCC1Q96S66 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLCC1Q96S66 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLCC1Q96S66 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCC1Q96S66 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCC1Q96S66 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCC1Q96S66 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.05■□□□□ 0.16
CLCC1Q96S66 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
CLCC1Q96S66 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.05■□□□□ 0.16
CLCC1Q96S66 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.05■□□□□ 0.16
CLCC1Q96S66 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.05■□□□□ 0.16
CLCC1Q96S66 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCC1Q96S66 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CLCC1Q96S66 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCC1Q96S66 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.05■□□□□ 0.16
CLCC1Q96S66 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCC1Q96S66 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCC1Q96S66 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.05■□□□□ 0.16
CLCC1Q96S66 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCC1Q96S66 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCC1Q96S66 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.04■□□□□ 0.16
CLCC1Q96S66 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.04■□□□□ 0.16
CLCC1Q96S66 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCC1Q96S66 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCC1Q96S66 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
CLCC1Q96S66 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.04■□□□□ 0.16
CLCC1Q96S66 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
CLCC1Q96S66 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLCC1Q96S66 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCC1Q96S66 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.04■□□□□ 0.16
CLCC1Q96S66 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
CLCC1Q96S66 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCC1Q96S66 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.04■□□□□ 0.16
CLCC1Q96S66 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CLCC1Q96S66 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.04■□□□□ 0.16
CLCC1Q96S66 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms