Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
C9orf72Q96LT7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
C9orf72Q96LT7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.67■□□□□ 0.74
C9orf72Q96LT7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
C9orf72Q96LT7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
C9orf72Q96LT7 WIZP1-201ENST00000531444 2299 ntBASIC19.67■□□□□ 0.74
C9orf72Q96LT7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
C9orf72Q96LT7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
C9orf72Q96LT7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
C9orf72Q96LT7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
C9orf72Q96LT7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
C9orf72Q96LT7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
C9orf72Q96LT7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
C9orf72Q96LT7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.66■□□□□ 0.74
C9orf72Q96LT7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
C9orf72Q96LT7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
C9orf72Q96LT7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
C9orf72Q96LT7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
C9orf72Q96LT7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
C9orf72Q96LT7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.66■□□□□ 0.74
C9orf72Q96LT7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
C9orf72Q96LT7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.66■□□□□ 0.74
C9orf72Q96LT7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
C9orf72Q96LT7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
C9orf72Q96LT7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
C9orf72Q96LT7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
C9orf72Q96LT7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
C9orf72Q96LT7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
C9orf72Q96LT7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
C9orf72Q96LT7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
C9orf72Q96LT7 AC018470.1-201ENST00000624790 3129 ntBASIC19.65■□□□□ 0.74
C9orf72Q96LT7 AL031598.1-201ENST00000561511 1773 ntBASIC19.65■□□□□ 0.74
C9orf72Q96LT7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
C9orf72Q96LT7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
C9orf72Q96LT7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
C9orf72Q96LT7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.65■□□□□ 0.74
C9orf72Q96LT7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
C9orf72Q96LT7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
C9orf72Q96LT7 AC098590.1-201ENST00000468126 897 ntBASIC19.65■□□□□ 0.74
C9orf72Q96LT7 AC008403.3-201ENST00000598924 454 ntBASIC19.65■□□□□ 0.74
C9orf72Q96LT7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
C9orf72Q96LT7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
C9orf72Q96LT7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
C9orf72Q96LT7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
C9orf72Q96LT7 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.64■□□□□ 0.74
C9orf72Q96LT7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
C9orf72Q96LT7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.64■□□□□ 0.73
C9orf72Q96LT7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
C9orf72Q96LT7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
C9orf72Q96LT7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.64■□□□□ 0.73
C9orf72Q96LT7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
C9orf72Q96LT7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
C9orf72Q96LT7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
C9orf72Q96LT7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
C9orf72Q96LT7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
C9orf72Q96LT7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
C9orf72Q96LT7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
C9orf72Q96LT7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.64■□□□□ 0.73
C9orf72Q96LT7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.64■□□□□ 0.73
C9orf72Q96LT7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.64■□□□□ 0.73
C9orf72Q96LT7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
C9orf72Q96LT7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
C9orf72Q96LT7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.64■□□□□ 0.73
C9orf72Q96LT7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
C9orf72Q96LT7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
C9orf72Q96LT7 AC104417.2-201ENST00000562989 1793 ntBASIC19.64■□□□□ 0.73
C9orf72Q96LT7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.64■□□□□ 0.73
C9orf72Q96LT7 AC124283.5-201ENST00000624661 1809 ntBASIC19.64■□□□□ 0.73
C9orf72Q96LT7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
C9orf72Q96LT7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
C9orf72Q96LT7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
C9orf72Q96LT7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.64■□□□□ 0.73
C9orf72Q96LT7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
C9orf72Q96LT7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.63■□□□□ 0.73
C9orf72Q96LT7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
C9orf72Q96LT7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.63■□□□□ 0.73
C9orf72Q96LT7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.63■□□□□ 0.73
C9orf72Q96LT7 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
C9orf72Q96LT7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
C9orf72Q96LT7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
C9orf72Q96LT7 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
C9orf72Q96LT7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
C9orf72Q96LT7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
C9orf72Q96LT7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
C9orf72Q96LT7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.63■□□□□ 0.73
C9orf72Q96LT7 UNC93B4-201ENST00000505679 747 ntBASIC19.63■□□□□ 0.73
C9orf72Q96LT7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.63■□□□□ 0.73
C9orf72Q96LT7 AC073648.6-201ENST00000641589 218 ntBASIC19.63■□□□□ 0.73
C9orf72Q96LT7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
C9orf72Q96LT7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
C9orf72Q96LT7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
C9orf72Q96LT7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
C9orf72Q96LT7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.63■□□□□ 0.73
C9orf72Q96LT7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
C9orf72Q96LT7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
C9orf72Q96LT7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
C9orf72Q96LT7 AC005332.8-201ENST00000622750 2735 ntBASIC19.62■□□□□ 0.73
C9orf72Q96LT7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
C9orf72Q96LT7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
C9orf72Q96LT7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms