Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE2Q96FN4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.6■□□□□ 0.25
CPNE2Q96FN4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE2Q96FN4 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.6■□□□□ 0.25
CPNE2Q96FN4 RPS2P52-201ENST00000469610 820 ntBASIC16.6■□□□□ 0.25
CPNE2Q96FN4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.6■□□□□ 0.25
CPNE2Q96FN4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.6■□□□□ 0.25
CPNE2Q96FN4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.6■□□□□ 0.25
CPNE2Q96FN4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.6■□□□□ 0.25
CPNE2Q96FN4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.6■□□□□ 0.25
CPNE2Q96FN4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.6■□□□□ 0.25
CPNE2Q96FN4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.6■□□□□ 0.25
CPNE2Q96FN4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.6■□□□□ 0.25
CPNE2Q96FN4 AL050303.2-201ENST00000619798 666 ntBASIC16.6■□□□□ 0.25
CPNE2Q96FN4 HLA-B-256ENST00000639848 1089 ntBASIC16.6■□□□□ 0.25
CPNE2Q96FN4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE2Q96FN4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE2Q96FN4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.6■□□□□ 0.25
CPNE2Q96FN4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE2Q96FN4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE2Q96FN4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE2Q96FN4 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CPNE2Q96FN4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE2Q96FN4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.6■□□□□ 0.25
CPNE2Q96FN4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE2Q96FN4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.59■□□□□ 0.25
CPNE2Q96FN4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE2Q96FN4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE2Q96FN4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
CPNE2Q96FN4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE2Q96FN4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.59■□□□□ 0.25
CPNE2Q96FN4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE2Q96FN4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
CPNE2Q96FN4 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE2Q96FN4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE2Q96FN4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CPNE2Q96FN4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.59■□□□□ 0.25
CPNE2Q96FN4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE2Q96FN4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CPNE2Q96FN4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE2Q96FN4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.59■□□□□ 0.25
CPNE2Q96FN4 AC091874.3-201ENST00000512672 1195 ntBASIC16.59■□□□□ 0.25
CPNE2Q96FN4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.59■□□□□ 0.25
CPNE2Q96FN4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.59■□□□□ 0.25
CPNE2Q96FN4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE2Q96FN4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE2Q96FN4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.59■□□□□ 0.25
CPNE2Q96FN4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE2Q96FN4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE2Q96FN4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CPNE2Q96FN4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE2Q96FN4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.59■□□□□ 0.25
CPNE2Q96FN4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.58■□□□□ 0.25
CPNE2Q96FN4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CPNE2Q96FN4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CPNE2Q96FN4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CPNE2Q96FN4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE2Q96FN4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CPNE2Q96FN4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CPNE2Q96FN4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CPNE2Q96FN4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.58■□□□□ 0.24
CPNE2Q96FN4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.58■□□□□ 0.24
CPNE2Q96FN4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.58■□□□□ 0.24
CPNE2Q96FN4 AC097658.1-201ENST00000475555 843 ntBASIC16.58■□□□□ 0.24
CPNE2Q96FN4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.58■□□□□ 0.24
CPNE2Q96FN4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.58■□□□□ 0.24
CPNE2Q96FN4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE2Q96FN4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE2Q96FN4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.58■□□□□ 0.24
CPNE2Q96FN4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.58■□□□□ 0.24
CPNE2Q96FN4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.58■□□□□ 0.24
CPNE2Q96FN4 AC092368.3-202ENST00000574180 1591 ntBASIC16.58■□□□□ 0.24
CPNE2Q96FN4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE2Q96FN4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE2Q96FN4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CPNE2Q96FN4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE2Q96FN4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE2Q96FN4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.58■□□□□ 0.24
CPNE2Q96FN4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE2Q96FN4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE2Q96FN4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE2Q96FN4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE2Q96FN4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE2Q96FN4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.58■□□□□ 0.24
CPNE2Q96FN4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE2Q96FN4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE2Q96FN4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE2Q96FN4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE2Q96FN4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE2Q96FN4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE2Q96FN4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE2Q96FN4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.57■□□□□ 0.24
CPNE2Q96FN4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.57■□□□□ 0.24
CPNE2Q96FN4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE2Q96FN4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE2Q96FN4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.57■□□□□ 0.24
CPNE2Q96FN4 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CPNE2Q96FN4 TEX21P-204ENST00000641479 1693 ntBASIC16.57■□□□□ 0.24
CPNE2Q96FN4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE2Q96FN4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms