Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NCLNQ969V3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
NCLNQ969V3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NCLNQ969V3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.53■□□□□ 0.56
NCLNQ969V3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NCLNQ969V3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.52■□□□□ 0.56
NCLNQ969V3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.52■□□□□ 0.56
NCLNQ969V3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NCLNQ969V3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NCLNQ969V3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCLNQ969V3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCLNQ969V3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.52■□□□□ 0.56
NCLNQ969V3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NCLNQ969V3 GCSHP5-201ENST00000443090 522 ntBASIC18.52■□□□□ 0.56
NCLNQ969V3 AL158047.1-201ENST00000445918 881 ntBASIC18.52■□□□□ 0.56
NCLNQ969V3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.52■□□□□ 0.56
NCLNQ969V3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
NCLNQ969V3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
NCLNQ969V3 MTDHP1-201ENST00000605323 784 ntBASIC18.52■□□□□ 0.56
NCLNQ969V3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
NCLNQ969V3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCLNQ969V3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCLNQ969V3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
NCLNQ969V3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
NCLNQ969V3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NCLNQ969V3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
NCLNQ969V3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NCLNQ969V3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
NCLNQ969V3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NCLNQ969V3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
NCLNQ969V3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.51■□□□□ 0.55
NCLNQ969V3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCLNQ969V3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
NCLNQ969V3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCLNQ969V3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCLNQ969V3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.51■□□□□ 0.55
NCLNQ969V3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.51■□□□□ 0.55
NCLNQ969V3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCLNQ969V3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCLNQ969V3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCLNQ969V3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCLNQ969V3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NCLNQ969V3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.51■□□□□ 0.55
NCLNQ969V3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
NCLNQ969V3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.51■□□□□ 0.55
NCLNQ969V3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
NCLNQ969V3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.51■□□□□ 0.55
NCLNQ969V3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.51■□□□□ 0.55
NCLNQ969V3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.51■□□□□ 0.55
NCLNQ969V3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.51■□□□□ 0.55
NCLNQ969V3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NCLNQ969V3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NCLNQ969V3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCLNQ969V3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCLNQ969V3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCLNQ969V3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
NCLNQ969V3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCLNQ969V3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
NCLNQ969V3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
NCLNQ969V3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
NCLNQ969V3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NCLNQ969V3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCLNQ969V3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCLNQ969V3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCLNQ969V3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCLNQ969V3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCLNQ969V3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCLNQ969V3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.5■□□□□ 0.55
NCLNQ969V3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
NCLNQ969V3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCLNQ969V3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.5■□□□□ 0.55
NCLNQ969V3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCLNQ969V3 RPPH1-201ENST00000516869 333 ntBASIC18.5■□□□□ 0.55
NCLNQ969V3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.5■□□□□ 0.55
NCLNQ969V3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
NCLNQ969V3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.5■□□□□ 0.55
NCLNQ969V3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCLNQ969V3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.5■□□□□ 0.55
NCLNQ969V3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCLNQ969V3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCLNQ969V3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCLNQ969V3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCLNQ969V3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCLNQ969V3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.5■□□□□ 0.55
NCLNQ969V3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
NCLNQ969V3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCLNQ969V3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCLNQ969V3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCLNQ969V3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NCLNQ969V3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
NCLNQ969V3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCLNQ969V3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCLNQ969V3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCLNQ969V3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
NCLNQ969V3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.49■□□□□ 0.55
NCLNQ969V3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
NCLNQ969V3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCLNQ969V3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCLNQ969V3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
NCLNQ969V3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms