Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TM9SF4Q92544 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.03■□□□□ 0.48
TM9SF4Q92544 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
TM9SF4Q92544 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.03■□□□□ 0.48
TM9SF4Q92544 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TM9SF4Q92544 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TM9SF4Q92544 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.02■□□□□ 0.48
TM9SF4Q92544 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.02■□□□□ 0.48
TM9SF4Q92544 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TM9SF4Q92544 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TM9SF4Q92544 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TM9SF4Q92544 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.02■□□□□ 0.48
TM9SF4Q92544 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TM9SF4Q92544 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TM9SF4Q92544 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TM9SF4Q92544 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TM9SF4Q92544 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TM9SF4Q92544 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TM9SF4Q92544 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TM9SF4Q92544 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TM9SF4Q92544 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.02■□□□□ 0.48
TM9SF4Q92544 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.02■□□□□ 0.48
TM9SF4Q92544 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.02■□□□□ 0.48
TM9SF4Q92544 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.02■□□□□ 0.48
TM9SF4Q92544 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
TM9SF4Q92544 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.02■□□□□ 0.47
TM9SF4Q92544 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.47
TM9SF4Q92544 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TM9SF4Q92544 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.02■□□□□ 0.47
TM9SF4Q92544 PHGDH-210ENST00000641115 1638 ntBASIC18.01■□□□□ 0.47
TM9SF4Q92544 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM9SF4Q92544 AC093484.2-201ENST00000580996 2166 ntBASIC18.01■□□□□ 0.47
TM9SF4Q92544 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.01■□□□□ 0.47
TM9SF4Q92544 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM9SF4Q92544 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM9SF4Q92544 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM9SF4Q92544 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TM9SF4Q92544 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
TM9SF4Q92544 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TM9SF4Q92544 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
TM9SF4Q92544 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TM9SF4Q92544 AC097488.1-201ENST00000507834 756 ntBASIC18.01■□□□□ 0.47
TM9SF4Q92544 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TM9SF4Q92544 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.01■□□□□ 0.47
TM9SF4Q92544 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM9SF4Q92544 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.01■□□□□ 0.47
TM9SF4Q92544 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM9SF4Q92544 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM9SF4Q92544 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM9SF4Q92544 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TM9SF4Q92544 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM9SF4Q92544 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM9SF4Q92544 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.01■□□□□ 0.47
TM9SF4Q92544 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.01■□□□□ 0.47
TM9SF4Q92544 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.01■□□□□ 0.47
TM9SF4Q92544 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM9SF4Q92544 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.01■□□□□ 0.47
TM9SF4Q92544 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TM9SF4Q92544 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18■□□□□ 0.47
TM9SF4Q92544 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18■□□□□ 0.47
TM9SF4Q92544 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TM9SF4Q92544 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
TM9SF4Q92544 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TM9SF4Q92544 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TM9SF4Q92544 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18■□□□□ 0.47
TM9SF4Q92544 GOLGA6L3-201ENST00000507199 1679 ntBASIC18■□□□□ 0.47
TM9SF4Q92544 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TM9SF4Q92544 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18■□□□□ 0.47
TM9SF4Q92544 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TM9SF4Q92544 TSPY14P-201ENST00000303979 915 ntBASIC18■□□□□ 0.47
TM9SF4Q92544 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TM9SF4Q92544 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TM9SF4Q92544 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18■□□□□ 0.47
TM9SF4Q92544 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TM9SF4Q92544 CRYGFP-201ENST00000418459 633 ntBASIC18■□□□□ 0.47
TM9SF4Q92544 AC004980.1-204ENST00000429707 299 ntBASIC18■□□□□ 0.47
TM9SF4Q92544 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18■□□□□ 0.47
TM9SF4Q92544 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18■□□□□ 0.47
TM9SF4Q92544 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18■□□□□ 0.47
TM9SF4Q92544 LINC01238-205ENST00000567549 1107 ntBASIC18■□□□□ 0.47
TM9SF4Q92544 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18■□□□□ 0.47
TM9SF4Q92544 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TM9SF4Q92544 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18■□□□□ 0.47
TM9SF4Q92544 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18■□□□□ 0.47
TM9SF4Q92544 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
TM9SF4Q92544 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18■□□□□ 0.47
TM9SF4Q92544 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18■□□□□ 0.47
TM9SF4Q92544 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18■□□□□ 0.47
TM9SF4Q92544 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TM9SF4Q92544 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TM9SF4Q92544 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TM9SF4Q92544 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TM9SF4Q92544 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TM9SF4Q92544 AC073508.3-201ENST00000619697 1419 ntBASIC17.99■□□□□ 0.47
TM9SF4Q92544 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
TM9SF4Q92544 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.99■□□□□ 0.47
TM9SF4Q92544 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
TM9SF4Q92544 TMEM179-206ENST00000616017 1645 ntBASIC17.99■□□□□ 0.47
TM9SF4Q92544 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
TM9SF4Q92544 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms