Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RTN4IP1Q8WWV3 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.09■□□□□ 0.17
RTN4IP1Q8WWV3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.09■□□□□ 0.17
RTN4IP1Q8WWV3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.09■□□□□ 0.17
RTN4IP1Q8WWV3 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.09■□□□□ 0.17
RTN4IP1Q8WWV3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
RTN4IP1Q8WWV3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RTN4IP1Q8WWV3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RTN4IP1Q8WWV3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
RTN4IP1Q8WWV3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.09■□□□□ 0.17
RTN4IP1Q8WWV3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RTN4IP1Q8WWV3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.09■□□□□ 0.17
RTN4IP1Q8WWV3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RTN4IP1Q8WWV3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
RTN4IP1Q8WWV3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RTN4IP1Q8WWV3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.09■□□□□ 0.17
RTN4IP1Q8WWV3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RTN4IP1Q8WWV3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.08■□□□□ 0.17
RTN4IP1Q8WWV3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.08■□□□□ 0.17
RTN4IP1Q8WWV3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
RTN4IP1Q8WWV3 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
RTN4IP1Q8WWV3 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.17
RTN4IP1Q8WWV3 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
RTN4IP1Q8WWV3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
RTN4IP1Q8WWV3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
RTN4IP1Q8WWV3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RTN4IP1Q8WWV3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
RTN4IP1Q8WWV3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.08■□□□□ 0.17
RTN4IP1Q8WWV3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.08■□□□□ 0.17
RTN4IP1Q8WWV3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.08■□□□□ 0.17
RTN4IP1Q8WWV3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
RTN4IP1Q8WWV3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
RTN4IP1Q8WWV3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.16
RTN4IP1Q8WWV3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.08■□□□□ 0.16
RTN4IP1Q8WWV3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
RTN4IP1Q8WWV3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RTN4IP1Q8WWV3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RTN4IP1Q8WWV3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
RTN4IP1Q8WWV3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RTN4IP1Q8WWV3 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RTN4IP1Q8WWV3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.08■□□□□ 0.16
RTN4IP1Q8WWV3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RTN4IP1Q8WWV3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.08■□□□□ 0.16
RTN4IP1Q8WWV3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.08■□□□□ 0.16
RTN4IP1Q8WWV3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.08■□□□□ 0.16
RTN4IP1Q8WWV3 PNMA6B-201ENST00000538162 1200 ntBASIC16.08■□□□□ 0.16
RTN4IP1Q8WWV3 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.08■□□□□ 0.16
RTN4IP1Q8WWV3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.08■□□□□ 0.16
RTN4IP1Q8WWV3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.08■□□□□ 0.16
RTN4IP1Q8WWV3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.08■□□□□ 0.16
RTN4IP1Q8WWV3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.08■□□□□ 0.16
RTN4IP1Q8WWV3 AL390961.4-201ENST00000623958 2535 ntBASIC16.08■□□□□ 0.16
RTN4IP1Q8WWV3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
RTN4IP1Q8WWV3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.08■□□□□ 0.16
RTN4IP1Q8WWV3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.08■□□□□ 0.16
RTN4IP1Q8WWV3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RTN4IP1Q8WWV3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RTN4IP1Q8WWV3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RTN4IP1Q8WWV3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.07■□□□□ 0.16
RTN4IP1Q8WWV3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RTN4IP1Q8WWV3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.07■□□□□ 0.16
RTN4IP1Q8WWV3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RTN4IP1Q8WWV3 AC135050.7-201ENST00000624508 2218 ntBASIC16.07■□□□□ 0.16
RTN4IP1Q8WWV3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RTN4IP1Q8WWV3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.07■□□□□ 0.16
RTN4IP1Q8WWV3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.07■□□□□ 0.16
RTN4IP1Q8WWV3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RTN4IP1Q8WWV3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RTN4IP1Q8WWV3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
RTN4IP1Q8WWV3 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.07■□□□□ 0.16
RTN4IP1Q8WWV3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.07■□□□□ 0.16
RTN4IP1Q8WWV3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.07■□□□□ 0.16
RTN4IP1Q8WWV3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RTN4IP1Q8WWV3 AC006557.6-201ENST00000623071 864 ntBASIC16.07■□□□□ 0.16
RTN4IP1Q8WWV3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RTN4IP1Q8WWV3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.07■□□□□ 0.16
RTN4IP1Q8WWV3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RTN4IP1Q8WWV3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RTN4IP1Q8WWV3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RTN4IP1Q8WWV3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.07■□□□□ 0.16
RTN4IP1Q8WWV3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.07■□□□□ 0.16
RTN4IP1Q8WWV3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RTN4IP1Q8WWV3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.07■□□□□ 0.16
RTN4IP1Q8WWV3 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RTN4IP1Q8WWV3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RTN4IP1Q8WWV3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.07■□□□□ 0.16
RTN4IP1Q8WWV3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RTN4IP1Q8WWV3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.07■□□□□ 0.16
RTN4IP1Q8WWV3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.07■□□□□ 0.16
RTN4IP1Q8WWV3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
RTN4IP1Q8WWV3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RTN4IP1Q8WWV3 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
RTN4IP1Q8WWV3 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
RTN4IP1Q8WWV3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RTN4IP1Q8WWV3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RTN4IP1Q8WWV3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
RTN4IP1Q8WWV3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RTN4IP1Q8WWV3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RTN4IP1Q8WWV3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RTN4IP1Q8WWV3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms