Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.06■□□□□ 0.64
RAB3IL1Q8TBN0 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.06■□□□□ 0.64
RAB3IL1Q8TBN0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB3IL1Q8TBN0 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB3IL1Q8TBN0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.05■□□□□ 0.64
RAB3IL1Q8TBN0 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB3IL1Q8TBN0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB3IL1Q8TBN0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.05■□□□□ 0.64
RAB3IL1Q8TBN0 NFIC-211ENST00000641145 8399 ntBASIC19.05■□□□□ 0.64
RAB3IL1Q8TBN0 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB3IL1Q8TBN0 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB3IL1Q8TBN0 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB3IL1Q8TBN0 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB3IL1Q8TBN0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.05■□□□□ 0.64
RAB3IL1Q8TBN0 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB3IL1Q8TBN0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RAB3IL1Q8TBN0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.05■□□□□ 0.64
RAB3IL1Q8TBN0 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.05■□□□□ 0.64
RAB3IL1Q8TBN0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.05■□□□□ 0.64
RAB3IL1Q8TBN0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.05■□□□□ 0.64
RAB3IL1Q8TBN0 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB3IL1Q8TBN0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RAB3IL1Q8TBN0 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
RAB3IL1Q8TBN0 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RAB3IL1Q8TBN0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
RAB3IL1Q8TBN0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB3IL1Q8TBN0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RAB3IL1Q8TBN0 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RAB3IL1Q8TBN0 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
RAB3IL1Q8TBN0 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB3IL1Q8TBN0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAB3IL1Q8TBN0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.04■□□□□ 0.64
RAB3IL1Q8TBN0 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.04■□□□□ 0.64
RAB3IL1Q8TBN0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.04■□□□□ 0.64
RAB3IL1Q8TBN0 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.04■□□□□ 0.64
RAB3IL1Q8TBN0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAB3IL1Q8TBN0 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.04■□□□□ 0.64
RAB3IL1Q8TBN0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB3IL1Q8TBN0 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB3IL1Q8TBN0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.04■□□□□ 0.64
RAB3IL1Q8TBN0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAB3IL1Q8TBN0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB3IL1Q8TBN0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAB3IL1Q8TBN0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.04■□□□□ 0.64
RAB3IL1Q8TBN0 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.04■□□□□ 0.64
RAB3IL1Q8TBN0 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.04■□□□□ 0.64
RAB3IL1Q8TBN0 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
RAB3IL1Q8TBN0 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.04■□□□□ 0.64
RAB3IL1Q8TBN0 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB3IL1Q8TBN0 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAB3IL1Q8TBN0 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.04■□□□□ 0.64
RAB3IL1Q8TBN0 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB3IL1Q8TBN0 CROCCP1-201ENST00000426910 5675 ntBASIC19.04■□□□□ 0.64
RAB3IL1Q8TBN0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB3IL1Q8TBN0 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.04■□□□□ 0.64
RAB3IL1Q8TBN0 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB3IL1Q8TBN0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB3IL1Q8TBN0 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RAB3IL1Q8TBN0 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.03■□□□□ 0.64
RAB3IL1Q8TBN0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RAB3IL1Q8TBN0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
RAB3IL1Q8TBN0 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
RAB3IL1Q8TBN0 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB3IL1Q8TBN0 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB3IL1Q8TBN0 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB3IL1Q8TBN0 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RAB3IL1Q8TBN0 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RAB3IL1Q8TBN0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
RAB3IL1Q8TBN0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.03■□□□□ 0.64
RAB3IL1Q8TBN0 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RAB3IL1Q8TBN0 IKBKGP1-201ENST00000612193 1073 ntBASIC19.03■□□□□ 0.64
RAB3IL1Q8TBN0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB3IL1Q8TBN0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.03■□□□□ 0.64
RAB3IL1Q8TBN0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RAB3IL1Q8TBN0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.03■□□□□ 0.64
RAB3IL1Q8TBN0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.03■□□□□ 0.64
RAB3IL1Q8TBN0 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB3IL1Q8TBN0 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RAB3IL1Q8TBN0 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RAB3IL1Q8TBN0 NOC2LP1-202ENST00000452600 2235 ntBASIC19.02■□□□□ 0.64
RAB3IL1Q8TBN0 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAB3IL1Q8TBN0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.02■□□□□ 0.64
RAB3IL1Q8TBN0 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.02■□□□□ 0.64
RAB3IL1Q8TBN0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
RAB3IL1Q8TBN0 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.02■□□□□ 0.64
RAB3IL1Q8TBN0 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAB3IL1Q8TBN0 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAB3IL1Q8TBN0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.02■□□□□ 0.64
RAB3IL1Q8TBN0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
RAB3IL1Q8TBN0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAB3IL1Q8TBN0 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.02■□□□□ 0.64
RAB3IL1Q8TBN0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.02■□□□□ 0.64
RAB3IL1Q8TBN0 AC022517.1-201ENST00000592429 346 ntBASIC19.02■□□□□ 0.64
RAB3IL1Q8TBN0 AC069236.1-201ENST00000604339 616 ntBASIC19.02■□□□□ 0.64
RAB3IL1Q8TBN0 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAB3IL1Q8TBN0 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAB3IL1Q8TBN0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAB3IL1Q8TBN0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAB3IL1Q8TBN0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
RAB3IL1Q8TBN0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms