Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FNDC9Q8TBE3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
FNDC9Q8TBE3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
FNDC9Q8TBE3 ZNF815P-204ENST00000434898 1737 ntBASIC17.21■□□□□ 0.35
FNDC9Q8TBE3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
FNDC9Q8TBE3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
FNDC9Q8TBE3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.2■□□□□ 0.34
FNDC9Q8TBE3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FNDC9Q8TBE3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.2■□□□□ 0.34
FNDC9Q8TBE3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
FNDC9Q8TBE3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.2■□□□□ 0.34
FNDC9Q8TBE3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FNDC9Q8TBE3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FNDC9Q8TBE3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.2■□□□□ 0.34
FNDC9Q8TBE3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.2■□□□□ 0.34
FNDC9Q8TBE3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.2■□□□□ 0.34
FNDC9Q8TBE3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.2■□□□□ 0.34
FNDC9Q8TBE3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.2■□□□□ 0.34
FNDC9Q8TBE3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.2■□□□□ 0.34
FNDC9Q8TBE3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
FNDC9Q8TBE3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FNDC9Q8TBE3 KRT8P41-201ENST00000533985 1514 ntBASIC17.2■□□□□ 0.34
FNDC9Q8TBE3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.2■□□□□ 0.34
FNDC9Q8TBE3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.2■□□□□ 0.34
FNDC9Q8TBE3 AC104417.2-201ENST00000562989 1793 ntBASIC17.2■□□□□ 0.34
FNDC9Q8TBE3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FNDC9Q8TBE3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FNDC9Q8TBE3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FNDC9Q8TBE3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FNDC9Q8TBE3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
FNDC9Q8TBE3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
FNDC9Q8TBE3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.19■□□□□ 0.34
FNDC9Q8TBE3 CYP2D8P-201ENST00000433633 1490 ntBASIC17.19■□□□□ 0.34
FNDC9Q8TBE3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FNDC9Q8TBE3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
FNDC9Q8TBE3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FNDC9Q8TBE3 HCG11-201ENST00000411553 5696 ntBASIC17.19■□□□□ 0.34
FNDC9Q8TBE3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FNDC9Q8TBE3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.19■□□□□ 0.34
FNDC9Q8TBE3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FNDC9Q8TBE3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FNDC9Q8TBE3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
FNDC9Q8TBE3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.19■□□□□ 0.34
FNDC9Q8TBE3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.19■□□□□ 0.34
FNDC9Q8TBE3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FNDC9Q8TBE3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FNDC9Q8TBE3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.19■□□□□ 0.34
FNDC9Q8TBE3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.19■□□□□ 0.34
FNDC9Q8TBE3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.19■□□□□ 0.34
FNDC9Q8TBE3 NAPSB-206ENST00000562112 1266 ntBASIC17.19■□□□□ 0.34
FNDC9Q8TBE3 AP005242.2-201ENST00000580065 1175 ntBASIC17.19■□□□□ 0.34
FNDC9Q8TBE3 AC097493.4-201ENST00000641197 219 ntBASIC17.19■□□□□ 0.34
FNDC9Q8TBE3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FNDC9Q8TBE3 TREX1-205ENST00000625293 1783 ntBASIC17.19■□□□□ 0.34
FNDC9Q8TBE3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FNDC9Q8TBE3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FNDC9Q8TBE3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
FNDC9Q8TBE3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.19■□□□□ 0.34
FNDC9Q8TBE3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FNDC9Q8TBE3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
FNDC9Q8TBE3 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FNDC9Q8TBE3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FNDC9Q8TBE3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
FNDC9Q8TBE3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FNDC9Q8TBE3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
FNDC9Q8TBE3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FNDC9Q8TBE3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FNDC9Q8TBE3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FNDC9Q8TBE3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.18■□□□□ 0.34
FNDC9Q8TBE3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.18■□□□□ 0.34
FNDC9Q8TBE3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.18■□□□□ 0.34
FNDC9Q8TBE3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
FNDC9Q8TBE3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FNDC9Q8TBE3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.18■□□□□ 0.34
FNDC9Q8TBE3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.18■□□□□ 0.34
FNDC9Q8TBE3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
FNDC9Q8TBE3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.18■□□□□ 0.34
FNDC9Q8TBE3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.18■□□□□ 0.34
FNDC9Q8TBE3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.18■□□□□ 0.34
FNDC9Q8TBE3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.18■□□□□ 0.34
FNDC9Q8TBE3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.18■□□□□ 0.34
FNDC9Q8TBE3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.18■□□□□ 0.34
FNDC9Q8TBE3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
FNDC9Q8TBE3 AC012306.2-201ENST00000609350 630 ntBASIC17.18■□□□□ 0.34
FNDC9Q8TBE3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.18■□□□□ 0.34
FNDC9Q8TBE3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.18■□□□□ 0.34
FNDC9Q8TBE3 AC087289.5-201ENST00000586076 3175 ntBASIC17.18■□□□□ 0.34
FNDC9Q8TBE3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FNDC9Q8TBE3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FNDC9Q8TBE3 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.18■□□□□ 0.34
FNDC9Q8TBE3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
FNDC9Q8TBE3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FNDC9Q8TBE3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FNDC9Q8TBE3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FNDC9Q8TBE3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FNDC9Q8TBE3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.17■□□□□ 0.34
FNDC9Q8TBE3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.17■□□□□ 0.34
FNDC9Q8TBE3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.17■□□□□ 0.34
FNDC9Q8TBE3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FNDC9Q8TBE3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms