Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNIH3Q8TBE1 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNIH3Q8TBE1 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.46■□□□□ 0.39
CNIH3Q8TBE1 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CNIH3Q8TBE1 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNIH3Q8TBE1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNIH3Q8TBE1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNIH3Q8TBE1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNIH3Q8TBE1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.46■□□□□ 0.39
CNIH3Q8TBE1 KRT18P68-201ENST00000392293 1000 ntBASIC17.46■□□□□ 0.39
CNIH3Q8TBE1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.46■□□□□ 0.39
CNIH3Q8TBE1 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.46■□□□□ 0.39
CNIH3Q8TBE1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.46■□□□□ 0.39
CNIH3Q8TBE1 AC100791.3-201ENST00000617619 330 ntBASIC17.46■□□□□ 0.39
CNIH3Q8TBE1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNIH3Q8TBE1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNIH3Q8TBE1 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CNIH3Q8TBE1 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CNIH3Q8TBE1 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNIH3Q8TBE1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.46■□□□□ 0.39
CNIH3Q8TBE1 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.46■□□□□ 0.39
CNIH3Q8TBE1 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNIH3Q8TBE1 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CNIH3Q8TBE1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.46■□□□□ 0.39
CNIH3Q8TBE1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
CNIH3Q8TBE1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CNIH3Q8TBE1 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.46■□□□□ 0.38
CNIH3Q8TBE1 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.46■□□□□ 0.38
CNIH3Q8TBE1 AC104417.2-201ENST00000562989 1793 ntBASIC17.45■□□□□ 0.38
CNIH3Q8TBE1 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CNIH3Q8TBE1 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNIH3Q8TBE1 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNIH3Q8TBE1 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.45■□□□□ 0.38
CNIH3Q8TBE1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNIH3Q8TBE1 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNIH3Q8TBE1 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.45■□□□□ 0.38
CNIH3Q8TBE1 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNIH3Q8TBE1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CNIH3Q8TBE1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNIH3Q8TBE1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNIH3Q8TBE1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNIH3Q8TBE1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNIH3Q8TBE1 AC123595.1-201ENST00000440769 1046 ntBASIC17.45■□□□□ 0.38
CNIH3Q8TBE1 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.45■□□□□ 0.38
CNIH3Q8TBE1 KRT18P14-201ENST00000534205 1250 ntBASIC17.45■□□□□ 0.38
CNIH3Q8TBE1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.45■□□□□ 0.38
CNIH3Q8TBE1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.45■□□□□ 0.38
CNIH3Q8TBE1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
CNIH3Q8TBE1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CNIH3Q8TBE1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.45■□□□□ 0.38
CNIH3Q8TBE1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.45■□□□□ 0.38
CNIH3Q8TBE1 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNIH3Q8TBE1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.45■□□□□ 0.38
CNIH3Q8TBE1 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNIH3Q8TBE1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNIH3Q8TBE1 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.45■□□□□ 0.38
CNIH3Q8TBE1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNIH3Q8TBE1 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.45■□□□□ 0.38
CNIH3Q8TBE1 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.45■□□□□ 0.38
CNIH3Q8TBE1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNIH3Q8TBE1 AC106820.2-201ENST00000563775 3264 ntBASIC17.45■□□□□ 0.38
CNIH3Q8TBE1 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.44■□□□□ 0.38
CNIH3Q8TBE1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNIH3Q8TBE1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.44■□□□□ 0.38
CNIH3Q8TBE1 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNIH3Q8TBE1 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNIH3Q8TBE1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNIH3Q8TBE1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNIH3Q8TBE1 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNIH3Q8TBE1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNIH3Q8TBE1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.44■□□□□ 0.38
CNIH3Q8TBE1 KRT19P1-201ENST00000405746 1186 ntBASIC17.44■□□□□ 0.38
CNIH3Q8TBE1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNIH3Q8TBE1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CNIH3Q8TBE1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.44■□□□□ 0.38
CNIH3Q8TBE1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.44■□□□□ 0.38
CNIH3Q8TBE1 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.44■□□□□ 0.38
CNIH3Q8TBE1 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNIH3Q8TBE1 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNIH3Q8TBE1 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CNIH3Q8TBE1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.44■□□□□ 0.38
CNIH3Q8TBE1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.44■□□□□ 0.38
CNIH3Q8TBE1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.44■□□□□ 0.38
CNIH3Q8TBE1 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNIH3Q8TBE1 AC008764.6-201ENST00000595909 2069 ntBASIC17.44■□□□□ 0.38
CNIH3Q8TBE1 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
CNIH3Q8TBE1 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CNIH3Q8TBE1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNIH3Q8TBE1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNIH3Q8TBE1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.43■□□□□ 0.38
CNIH3Q8TBE1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.43■□□□□ 0.38
CNIH3Q8TBE1 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNIH3Q8TBE1 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CNIH3Q8TBE1 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNIH3Q8TBE1 MKRN4P-201ENST00000444706 1521 ntBASIC17.43■□□□□ 0.38
CNIH3Q8TBE1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.43■□□□□ 0.38
CNIH3Q8TBE1 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNIH3Q8TBE1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNIH3Q8TBE1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNIH3Q8TBE1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms