Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHKBP1Q8TBC3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SHKBP1Q8TBC3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHKBP1Q8TBC3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.07■□□□□ 0.8
SHKBP1Q8TBC3 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.06■□□□□ 0.8
SHKBP1Q8TBC3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHKBP1Q8TBC3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHKBP1Q8TBC3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SHKBP1Q8TBC3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.06■□□□□ 0.8
SHKBP1Q8TBC3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHKBP1Q8TBC3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.06■□□□□ 0.8
SHKBP1Q8TBC3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHKBP1Q8TBC3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHKBP1Q8TBC3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHKBP1Q8TBC3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHKBP1Q8TBC3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SHKBP1Q8TBC3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SHKBP1Q8TBC3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHKBP1Q8TBC3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SHKBP1Q8TBC3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SHKBP1Q8TBC3 KRT8P11-201ENST00000409686 1436 ntBASIC20.06■□□□□ 0.8
SHKBP1Q8TBC3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.06■□□□□ 0.8
SHKBP1Q8TBC3 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.06■□□□□ 0.8
SHKBP1Q8TBC3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.06■□□□□ 0.8
SHKBP1Q8TBC3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.06■□□□□ 0.8
SHKBP1Q8TBC3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.06■□□□□ 0.8
SHKBP1Q8TBC3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.06■□□□□ 0.8
SHKBP1Q8TBC3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.06■□□□□ 0.8
SHKBP1Q8TBC3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.06■□□□□ 0.8
SHKBP1Q8TBC3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.06■□□□□ 0.8
SHKBP1Q8TBC3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHKBP1Q8TBC3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.06■□□□□ 0.8
SHKBP1Q8TBC3 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.06■□□□□ 0.8
SHKBP1Q8TBC3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHKBP1Q8TBC3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
SHKBP1Q8TBC3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SHKBP1Q8TBC3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHKBP1Q8TBC3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHKBP1Q8TBC3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.05■□□□□ 0.8
SHKBP1Q8TBC3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.05■□□□□ 0.8
SHKBP1Q8TBC3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHKBP1Q8TBC3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.05■□□□□ 0.8
SHKBP1Q8TBC3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHKBP1Q8TBC3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
SHKBP1Q8TBC3 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.05■□□□□ 0.8
SHKBP1Q8TBC3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SHKBP1Q8TBC3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.05■□□□□ 0.8
SHKBP1Q8TBC3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.05■□□□□ 0.8
SHKBP1Q8TBC3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.05■□□□□ 0.8
SHKBP1Q8TBC3 AL031133.1-201ENST00000406807 723 ntBASIC20.05■□□□□ 0.8
SHKBP1Q8TBC3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.05■□□□□ 0.8
SHKBP1Q8TBC3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SHKBP1Q8TBC3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.05■□□□□ 0.8
SHKBP1Q8TBC3 AL358472.4-201ENST00000633140 710 ntBASIC20.05■□□□□ 0.8
SHKBP1Q8TBC3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHKBP1Q8TBC3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHKBP1Q8TBC3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHKBP1Q8TBC3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.05■□□□□ 0.8
SHKBP1Q8TBC3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.05■□□□□ 0.8
SHKBP1Q8TBC3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SHKBP1Q8TBC3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHKBP1Q8TBC3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.04■□□□□ 0.8
SHKBP1Q8TBC3 AC099778.1-201ENST00000568593 1911 ntBASIC20.04■□□□□ 0.8
SHKBP1Q8TBC3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.04■□□□□ 0.8
SHKBP1Q8TBC3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHKBP1Q8TBC3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.04■□□□□ 0.8
SHKBP1Q8TBC3 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.04■□□□□ 0.8
SHKBP1Q8TBC3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHKBP1Q8TBC3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHKBP1Q8TBC3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SHKBP1Q8TBC3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHKBP1Q8TBC3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SHKBP1Q8TBC3 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.04■□□□□ 0.8
SHKBP1Q8TBC3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHKBP1Q8TBC3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.04■□□□□ 0.8
SHKBP1Q8TBC3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SHKBP1Q8TBC3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.04■□□□□ 0.8
SHKBP1Q8TBC3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.04■□□□□ 0.8
SHKBP1Q8TBC3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.04■□□□□ 0.8
SHKBP1Q8TBC3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.04■□□□□ 0.8
SHKBP1Q8TBC3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SHKBP1Q8TBC3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHKBP1Q8TBC3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHKBP1Q8TBC3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.04■□□□□ 0.8
SHKBP1Q8TBC3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
SHKBP1Q8TBC3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
SHKBP1Q8TBC3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHKBP1Q8TBC3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
SHKBP1Q8TBC3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
SHKBP1Q8TBC3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHKBP1Q8TBC3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHKBP1Q8TBC3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SHKBP1Q8TBC3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SHKBP1Q8TBC3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.03■□□□□ 0.8
SHKBP1Q8TBC3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.03■□□□□ 0.8
SHKBP1Q8TBC3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHKBP1Q8TBC3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHKBP1Q8TBC3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.03■□□□□ 0.8
SHKBP1Q8TBC3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHKBP1Q8TBC3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms