Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH19Q8TAB3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDH19Q8TAB3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH19Q8TAB3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH19Q8TAB3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH19Q8TAB3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH19Q8TAB3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH19Q8TAB3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH19Q8TAB3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH19Q8TAB3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH19Q8TAB3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH19Q8TAB3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PCDH19Q8TAB3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH19Q8TAB3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH19Q8TAB3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH19Q8TAB3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH19Q8TAB3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH19Q8TAB3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PCDH19Q8TAB3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH19Q8TAB3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH19Q8TAB3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDH19Q8TAB3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH19Q8TAB3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH19Q8TAB3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.74■□□□□ 0.75
PCDH19Q8TAB3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.74■□□□□ 0.75
PCDH19Q8TAB3 RARRES2P10-201ENST00000564312 460 ntBASIC19.74■□□□□ 0.75
PCDH19Q8TAB3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDH19Q8TAB3 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.74■□□□□ 0.75
PCDH19Q8TAB3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH19Q8TAB3 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.74■□□□□ 0.75
PCDH19Q8TAB3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH19Q8TAB3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH19Q8TAB3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.74■□□□□ 0.75
PCDH19Q8TAB3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PCDH19Q8TAB3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PCDH19Q8TAB3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH19Q8TAB3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH19Q8TAB3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH19Q8TAB3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
PCDH19Q8TAB3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDH19Q8TAB3 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH19Q8TAB3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH19Q8TAB3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH19Q8TAB3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH19Q8TAB3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH19Q8TAB3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH19Q8TAB3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH19Q8TAB3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH19Q8TAB3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDH19Q8TAB3 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.73■□□□□ 0.75
PCDH19Q8TAB3 KSR1P1-201ENST00000446298 240 ntBASIC19.73■□□□□ 0.75
PCDH19Q8TAB3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH19Q8TAB3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.73■□□□□ 0.75
PCDH19Q8TAB3 AF186192.3-201ENST00000583427 947 ntBASIC19.73■□□□□ 0.75
PCDH19Q8TAB3 Z99916.2-201ENST00000604037 246 ntBASIC19.73■□□□□ 0.75
PCDH19Q8TAB3 AC131212.4-201ENST00000623606 975 ntBASIC19.73■□□□□ 0.75
PCDH19Q8TAB3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH19Q8TAB3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH19Q8TAB3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PCDH19Q8TAB3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH19Q8TAB3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH19Q8TAB3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH19Q8TAB3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH19Q8TAB3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PCDH19Q8TAB3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH19Q8TAB3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH19Q8TAB3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH19Q8TAB3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PCDH19Q8TAB3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDH19Q8TAB3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PCDH19Q8TAB3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH19Q8TAB3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH19Q8TAB3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PCDH19Q8TAB3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDH19Q8TAB3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH19Q8TAB3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PCDH19Q8TAB3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.72■□□□□ 0.75
PCDH19Q8TAB3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH19Q8TAB3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH19Q8TAB3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.72■□□□□ 0.75
PCDH19Q8TAB3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PCDH19Q8TAB3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDH19Q8TAB3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PCDH19Q8TAB3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDH19Q8TAB3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH19Q8TAB3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH19Q8TAB3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH19Q8TAB3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
PCDH19Q8TAB3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PCDH19Q8TAB3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH19Q8TAB3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH19Q8TAB3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH19Q8TAB3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PCDH19Q8TAB3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH19Q8TAB3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH19Q8TAB3 AL353807.1-201ENST00000427475 662 ntBASIC19.71■□□□□ 0.75
PCDH19Q8TAB3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH19Q8TAB3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDH19Q8TAB3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PCDH19Q8TAB3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms