Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 AC087393.1-201ENST00000582896 145 ntBASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 REST-206ENST00000612429 1376 ntTSL 5 BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 REST-207ENST00000616975 1370 ntTSL 5 BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SPTSSBQ8NFR3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 AC004687.1-201ENST00000579003 1625 ntBASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 PTENP1-202ENST00000532280 3996 ntBASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SPTSSBQ8NFR3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms