Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST3H2BBQ8N257 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.31□□□□□ -0.12
HIST3H2BBQ8N257 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST3H2BBQ8N257 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HIST3H2BBQ8N257 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
HIST3H2BBQ8N257 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC14.31□□□□□ -0.12
HIST3H2BBQ8N257 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST3H2BBQ8N257 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST3H2BBQ8N257 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.31□□□□□ -0.12
HIST3H2BBQ8N257 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.31□□□□□ -0.12
HIST3H2BBQ8N257 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST3H2BBQ8N257 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HIST3H2BBQ8N257 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST3H2BBQ8N257 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HIST3H2BBQ8N257 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
HIST3H2BBQ8N257 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST3H2BBQ8N257 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST3H2BBQ8N257 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.31□□□□□ -0.12
HIST3H2BBQ8N257 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST3H2BBQ8N257 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST3H2BBQ8N257 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST3H2BBQ8N257 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST3H2BBQ8N257 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.3□□□□□ -0.12
HIST3H2BBQ8N257 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.3□□□□□ -0.12
HIST3H2BBQ8N257 AP001094.4-201ENST00000579008 2176 ntBASIC14.3□□□□□ -0.12
HIST3H2BBQ8N257 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST3H2BBQ8N257 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.3□□□□□ -0.12
HIST3H2BBQ8N257 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC14.3□□□□□ -0.12
HIST3H2BBQ8N257 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC14.3□□□□□ -0.12
HIST3H2BBQ8N257 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST3H2BBQ8N257 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST3H2BBQ8N257 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST3H2BBQ8N257 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.3□□□□□ -0.12
HIST3H2BBQ8N257 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.3□□□□□ -0.12
HIST3H2BBQ8N257 AC008741.2-201ENST00000612792 3115 ntBASIC14.3□□□□□ -0.12
HIST3H2BBQ8N257 Z92544.1-202ENST00000571933 1220 ntBASIC14.3□□□□□ -0.12
HIST3H2BBQ8N257 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST3H2BBQ8N257 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HIST3H2BBQ8N257 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST3H2BBQ8N257 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HIST3H2BBQ8N257 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST3H2BBQ8N257 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
HIST3H2BBQ8N257 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC14.3□□□□□ -0.12
HIST3H2BBQ8N257 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST3H2BBQ8N257 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST3H2BBQ8N257 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HIST3H2BBQ8N257 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
HIST3H2BBQ8N257 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.3□□□□□ -0.12
HIST3H2BBQ8N257 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST3H2BBQ8N257 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.3□□□□□ -0.12
HIST3H2BBQ8N257 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
HIST3H2BBQ8N257 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HIST3H2BBQ8N257 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST3H2BBQ8N257 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HIST3H2BBQ8N257 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
HIST3H2BBQ8N257 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST3H2BBQ8N257 NARF-204ENST00000390006 1766 ntTSL 2 BASIC14.29□□□□□ -0.12
HIST3H2BBQ8N257 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC14.29□□□□□ -0.12
HIST3H2BBQ8N257 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.29□□□□□ -0.12
HIST3H2BBQ8N257 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST3H2BBQ8N257 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST3H2BBQ8N257 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
HIST3H2BBQ8N257 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST3H2BBQ8N257 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
HIST3H2BBQ8N257 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HIST3H2BBQ8N257 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HIST3H2BBQ8N257 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST3H2BBQ8N257 SPCS2P3-201ENST00000500401 656 ntBASIC14.29□□□□□ -0.12
HIST3H2BBQ8N257 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
HIST3H2BBQ8N257 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC14.29□□□□□ -0.12
HIST3H2BBQ8N257 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC14.29□□□□□ -0.12
HIST3H2BBQ8N257 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST3H2BBQ8N257 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.29□□□□□ -0.12
HIST3H2BBQ8N257 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
HIST3H2BBQ8N257 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST3H2BBQ8N257 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST3H2BBQ8N257 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HIST3H2BBQ8N257 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
HIST3H2BBQ8N257 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.29□□□□□ -0.12
HIST3H2BBQ8N257 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST3H2BBQ8N257 AC009102.2-201ENST00000606772 1639 ntBASIC14.29□□□□□ -0.12
HIST3H2BBQ8N257 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HIST3H2BBQ8N257 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.29□□□□□ -0.12
HIST3H2BBQ8N257 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.29□□□□□ -0.12
HIST3H2BBQ8N257 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.29□□□□□ -0.12
HIST3H2BBQ8N257 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HIST3H2BBQ8N257 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST3H2BBQ8N257 PKD1P1-201ENST00000458669 6805 ntBASIC14.29□□□□□ -0.12
HIST3H2BBQ8N257 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST3H2BBQ8N257 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
HIST3H2BBQ8N257 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST3H2BBQ8N257 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
HIST3H2BBQ8N257 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.28□□□□□ -0.12
HIST3H2BBQ8N257 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.28□□□□□ -0.12
HIST3H2BBQ8N257 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST3H2BBQ8N257 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST3H2BBQ8N257 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.28□□□□□ -0.12
HIST3H2BBQ8N257 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST3H2BBQ8N257 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
HIST3H2BBQ8N257 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms