Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
DHX40Q8IX18 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DHX40Q8IX18 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
DHX40Q8IX18 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DHX40Q8IX18 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.25■□□□□ 0.99
DHX40Q8IX18 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
DHX40Q8IX18 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.25■□□□□ 0.99
DHX40Q8IX18 AC142086.2-201ENST00000569753 217 ntBASIC21.25■□□□□ 0.99
DHX40Q8IX18 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.25■□□□□ 0.99
DHX40Q8IX18 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.25■□□□□ 0.99
DHX40Q8IX18 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
DHX40Q8IX18 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DHX40Q8IX18 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
DHX40Q8IX18 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
DHX40Q8IX18 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
DHX40Q8IX18 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DHX40Q8IX18 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC21.25■□□□□ 0.99
DHX40Q8IX18 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
DHX40Q8IX18 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DHX40Q8IX18 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DHX40Q8IX18 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.24■□□□□ 0.99
DHX40Q8IX18 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
DHX40Q8IX18 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DHX40Q8IX18 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DHX40Q8IX18 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
DHX40Q8IX18 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DHX40Q8IX18 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.24■□□□□ 0.99
DHX40Q8IX18 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DHX40Q8IX18 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DHX40Q8IX18 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DHX40Q8IX18 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
DHX40Q8IX18 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DHX40Q8IX18 CD276-201ENST00000318424 2738 ntTSL 5 BASIC21.24■□□□□ 0.99
DHX40Q8IX18 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.24■□□□□ 0.99
DHX40Q8IX18 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DHX40Q8IX18 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.24■□□□□ 0.99
DHX40Q8IX18 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DHX40Q8IX18 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
DHX40Q8IX18 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DHX40Q8IX18 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DHX40Q8IX18 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
DHX40Q8IX18 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.23■□□□□ 0.99
DHX40Q8IX18 KRT18P16-201ENST00000510337 1294 ntBASIC21.23■□□□□ 0.99
DHX40Q8IX18 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.23■□□□□ 0.99
DHX40Q8IX18 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.23■□□□□ 0.99
DHX40Q8IX18 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.23■□□□□ 0.99
DHX40Q8IX18 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.23■□□□□ 0.99
DHX40Q8IX18 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.23■□□□□ 0.99
DHX40Q8IX18 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DHX40Q8IX18 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
DHX40Q8IX18 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.23■□□□□ 0.99
DHX40Q8IX18 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
DHX40Q8IX18 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.23■□□□□ 0.99
DHX40Q8IX18 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.23■□□□□ 0.99
DHX40Q8IX18 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
DHX40Q8IX18 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DHX40Q8IX18 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.22■□□□□ 0.99
DHX40Q8IX18 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC21.22■□□□□ 0.99
DHX40Q8IX18 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DHX40Q8IX18 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DHX40Q8IX18 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.22■□□□□ 0.99
DHX40Q8IX18 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.22■□□□□ 0.99
DHX40Q8IX18 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.22■□□□□ 0.99
DHX40Q8IX18 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
DHX40Q8IX18 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
DHX40Q8IX18 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
DHX40Q8IX18 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.22■□□□□ 0.99
DHX40Q8IX18 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.22■□□□□ 0.99
DHX40Q8IX18 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.22■□□□□ 0.99
DHX40Q8IX18 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
DHX40Q8IX18 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
DHX40Q8IX18 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DHX40Q8IX18 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DHX40Q8IX18 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
DHX40Q8IX18 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DHX40Q8IX18 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.22■□□□□ 0.99
DHX40Q8IX18 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DHX40Q8IX18 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
DHX40Q8IX18 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DHX40Q8IX18 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DHX40Q8IX18 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
DHX40Q8IX18 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DHX40Q8IX18 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.21■□□□□ 0.99
DHX40Q8IX18 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.21■□□□□ 0.99
DHX40Q8IX18 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DHX40Q8IX18 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.21■□□□□ 0.99
DHX40Q8IX18 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.21■□□□□ 0.99
DHX40Q8IX18 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
DHX40Q8IX18 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
DHX40Q8IX18 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DHX40Q8IX18 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
DHX40Q8IX18 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DHX40Q8IX18 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC21.21■□□□□ 0.99
DHX40Q8IX18 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC21.21■□□□□ 0.99
DHX40Q8IX18 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
DHX40Q8IX18 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DHX40Q8IX18 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.21■□□□□ 0.99
DHX40Q8IX18 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
DHX40Q8IX18 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
DHX40Q8IX18 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms