Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD2Q8IV50 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD2Q8IV50 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD2Q8IV50 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD2Q8IV50 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD2Q8IV50 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
LYSMD2Q8IV50 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD2Q8IV50 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.79■□□□□ 0.28
LYSMD2Q8IV50 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD2Q8IV50 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD2Q8IV50 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.79■□□□□ 0.28
LYSMD2Q8IV50 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD2Q8IV50 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD2Q8IV50 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD2Q8IV50 EBPL-204ENST00000378272 766 ntTSL 3 BASIC16.79■□□□□ 0.28
LYSMD2Q8IV50 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
LYSMD2Q8IV50 AC007322.3-201ENST00000426526 701 ntBASIC16.79■□□□□ 0.28
LYSMD2Q8IV50 AL354811.1-201ENST00000610286 706 ntBASIC16.79■□□□□ 0.28
LYSMD2Q8IV50 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD2Q8IV50 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD2Q8IV50 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD2Q8IV50 AC018695.7-201ENST00000624587 2492 ntBASIC16.79■□□□□ 0.28
LYSMD2Q8IV50 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
LYSMD2Q8IV50 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD2Q8IV50 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD2Q8IV50 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
LYSMD2Q8IV50 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
LYSMD2Q8IV50 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
LYSMD2Q8IV50 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD2Q8IV50 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD2Q8IV50 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD2Q8IV50 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.78■□□□□ 0.28
LYSMD2Q8IV50 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LYSMD2Q8IV50 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD2Q8IV50 AC135776.1-201ENST00000319817 2481 ntBASIC16.78■□□□□ 0.28
LYSMD2Q8IV50 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.78■□□□□ 0.28
LYSMD2Q8IV50 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD2Q8IV50 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
LYSMD2Q8IV50 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD2Q8IV50 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD2Q8IV50 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD2Q8IV50 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.78■□□□□ 0.28
LYSMD2Q8IV50 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD2Q8IV50 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.78■□□□□ 0.28
LYSMD2Q8IV50 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD2Q8IV50 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD2Q8IV50 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.78■□□□□ 0.28
LYSMD2Q8IV50 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
LYSMD2Q8IV50 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LYSMD2Q8IV50 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD2Q8IV50 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.78■□□□□ 0.28
LYSMD2Q8IV50 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.78■□□□□ 0.28
LYSMD2Q8IV50 FAM21FP-204ENST00000608637 956 ntBASIC16.78■□□□□ 0.28
LYSMD2Q8IV50 AL358852.1-201ENST00000623174 1268 ntBASIC16.78■□□□□ 0.28
LYSMD2Q8IV50 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
LYSMD2Q8IV50 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.78■□□□□ 0.28
LYSMD2Q8IV50 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD2Q8IV50 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LYSMD2Q8IV50 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD2Q8IV50 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD2Q8IV50 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD2Q8IV50 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
LYSMD2Q8IV50 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.77■□□□□ 0.28
LYSMD2Q8IV50 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
LYSMD2Q8IV50 AD000864.1-201ENST00000624076 2295 ntBASIC16.77■□□□□ 0.28
LYSMD2Q8IV50 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LYSMD2Q8IV50 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
LYSMD2Q8IV50 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LYSMD2Q8IV50 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LYSMD2Q8IV50 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LYSMD2Q8IV50 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC16.77■□□□□ 0.28
LYSMD2Q8IV50 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.77■□□□□ 0.28
LYSMD2Q8IV50 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LYSMD2Q8IV50 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LYSMD2Q8IV50 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC16.77■□□□□ 0.28
LYSMD2Q8IV50 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LYSMD2Q8IV50 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.77■□□□□ 0.28
LYSMD2Q8IV50 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.77■□□□□ 0.28
LYSMD2Q8IV50 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.77■□□□□ 0.28
LYSMD2Q8IV50 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LYSMD2Q8IV50 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LYSMD2Q8IV50 PBX2P1-201ENST00000493219 1291 ntBASIC16.77■□□□□ 0.28
LYSMD2Q8IV50 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC16.77■□□□□ 0.28
LYSMD2Q8IV50 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LYSMD2Q8IV50 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
LYSMD2Q8IV50 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.77■□□□□ 0.28
LYSMD2Q8IV50 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LYSMD2Q8IV50 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.77■□□□□ 0.27
LYSMD2Q8IV50 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LYSMD2Q8IV50 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
LYSMD2Q8IV50 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LYSMD2Q8IV50 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LYSMD2Q8IV50 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LYSMD2Q8IV50 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD2Q8IV50 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD2Q8IV50 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD2Q8IV50 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LYSMD2Q8IV50 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD2Q8IV50 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD2Q8IV50 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms