Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC71Q8IV32 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC71Q8IV32 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC71Q8IV32 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CCDC71Q8IV32 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC71Q8IV32 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC71Q8IV32 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC71Q8IV32 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CCDC71Q8IV32 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC71Q8IV32 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CCDC71Q8IV32 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC71Q8IV32 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.91■□□□□ 0.46
CCDC71Q8IV32 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC71Q8IV32 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC71Q8IV32 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC71Q8IV32 AP001412.1-201ENST00000608405 714 ntBASIC17.91■□□□□ 0.46
CCDC71Q8IV32 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC71Q8IV32 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC71Q8IV32 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC71Q8IV32 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC71Q8IV32 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC71Q8IV32 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC71Q8IV32 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC71Q8IV32 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC71Q8IV32 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC71Q8IV32 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CCDC71Q8IV32 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CCDC71Q8IV32 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC71Q8IV32 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC71Q8IV32 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC71Q8IV32 AL135905.2-201ENST00000584934 1404 ntBASIC17.9■□□□□ 0.46
CCDC71Q8IV32 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC71Q8IV32 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CCDC71Q8IV32 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC71Q8IV32 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC71Q8IV32 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC71Q8IV32 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC71Q8IV32 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC71Q8IV32 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC71Q8IV32 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC71Q8IV32 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC71Q8IV32 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC71Q8IV32 TSPY15P-201ENST00000457163 923 ntBASIC17.9■□□□□ 0.46
CCDC71Q8IV32 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC71Q8IV32 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC71Q8IV32 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC71Q8IV32 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC71Q8IV32 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC71Q8IV32 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC71Q8IV32 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC71Q8IV32 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC71Q8IV32 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC71Q8IV32 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC71Q8IV32 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC71Q8IV32 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC71Q8IV32 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC71Q8IV32 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC71Q8IV32 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
CCDC71Q8IV32 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC71Q8IV32 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC71Q8IV32 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC71Q8IV32 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC71Q8IV32 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC71Q8IV32 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC71Q8IV32 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
CCDC71Q8IV32 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC71Q8IV32 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC71Q8IV32 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CCDC71Q8IV32 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC71Q8IV32 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.89■□□□□ 0.45
CCDC71Q8IV32 PRKY-204ENST00000533551 1019 ntBASIC17.89■□□□□ 0.45
CCDC71Q8IV32 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC71Q8IV32 LINC01023-201ENST00000606054 436 ntBASIC17.89■□□□□ 0.45
CCDC71Q8IV32 AC113410.3-201ENST00000623366 203 ntBASIC17.89■□□□□ 0.45
CCDC71Q8IV32 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC71Q8IV32 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC71Q8IV32 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC71Q8IV32 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC71Q8IV32 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC71Q8IV32 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CCDC71Q8IV32 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC71Q8IV32 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC71Q8IV32 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC71Q8IV32 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC71Q8IV32 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CCDC71Q8IV32 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CCDC71Q8IV32 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC71Q8IV32 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC71Q8IV32 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC71Q8IV32 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC71Q8IV32 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC71Q8IV32 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC71Q8IV32 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC71Q8IV32 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC71Q8IV32 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC71Q8IV32 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC71Q8IV32 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC71Q8IV32 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC71Q8IV32 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC71Q8IV32 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms