Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
LRRC28Q86X40 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC28Q86X40 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC28Q86X40 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.99■□□□□ 0.31
LRRC28Q86X40 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC28Q86X40 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
LRRC28Q86X40 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC28Q86X40 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC28Q86X40 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC28Q86X40 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.99■□□□□ 0.31
LRRC28Q86X40 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.99■□□□□ 0.31
LRRC28Q86X40 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.99■□□□□ 0.31
LRRC28Q86X40 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC28Q86X40 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC28Q86X40 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC28Q86X40 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC28Q86X40 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC28Q86X40 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC28Q86X40 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
LRRC28Q86X40 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC28Q86X40 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.99■□□□□ 0.31
LRRC28Q86X40 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.99■□□□□ 0.31
LRRC28Q86X40 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC28Q86X40 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC28Q86X40 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC28Q86X40 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
LRRC28Q86X40 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.99■□□□□ 0.31
LRRC28Q86X40 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
LRRC28Q86X40 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.99■□□□□ 0.31
LRRC28Q86X40 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC28Q86X40 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC28Q86X40 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRC28Q86X40 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRRC28Q86X40 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.98■□□□□ 0.31
LRRC28Q86X40 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRRC28Q86X40 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRC28Q86X40 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.98■□□□□ 0.31
LRRC28Q86X40 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRC28Q86X40 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRC28Q86X40 KRT8P17-201ENST00000453110 1448 ntBASIC16.98■□□□□ 0.31
LRRC28Q86X40 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRC28Q86X40 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRRC28Q86X40 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRC28Q86X40 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.98■□□□□ 0.31
LRRC28Q86X40 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.98■□□□□ 0.31
LRRC28Q86X40 Z98044.1-201ENST00000632503 1764 ntBASIC16.98■□□□□ 0.31
LRRC28Q86X40 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRRC28Q86X40 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.98■□□□□ 0.31
LRRC28Q86X40 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.98■□□□□ 0.31
LRRC28Q86X40 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.98■□□□□ 0.31
LRRC28Q86X40 UNC93B5-201ENST00000530315 699 ntBASIC16.98■□□□□ 0.31
LRRC28Q86X40 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRRC28Q86X40 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.98■□□□□ 0.31
LRRC28Q86X40 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRRC28Q86X40 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
LRRC28Q86X40 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRC28Q86X40 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRRC28Q86X40 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRC28Q86X40 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.98■□□□□ 0.31
LRRC28Q86X40 AC093525.10-201ENST00000625130 1569 ntBASIC16.98■□□□□ 0.31
LRRC28Q86X40 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.98■□□□□ 0.31
LRRC28Q86X40 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC28Q86X40 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC28Q86X40 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC28Q86X40 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC28Q86X40 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC28Q86X40 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC28Q86X40 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC28Q86X40 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC28Q86X40 POU5F1P3-201ENST00000428824 1078 ntBASIC16.97■□□□□ 0.31
LRRC28Q86X40 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRC28Q86X40 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRC28Q86X40 AC141586.3-201ENST00000562166 1838 ntBASIC16.97■□□□□ 0.31
LRRC28Q86X40 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC28Q86X40 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC28Q86X40 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC28Q86X40 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRC28Q86X40 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC28Q86X40 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC28Q86X40 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRC28Q86X40 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
LRRC28Q86X40 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC28Q86X40 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC28Q86X40 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC28Q86X40 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC28Q86X40 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRC28Q86X40 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC28Q86X40 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC28Q86X40 PTBP1P-201ENST00000554374 1601 ntBASIC16.96■□□□□ 0.31
LRRC28Q86X40 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC28Q86X40 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC28Q86X40 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC28Q86X40 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC28Q86X40 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC28Q86X40 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC28Q86X40 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
LRRC28Q86X40 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC28Q86X40 TMEM191A-211ENST00000637163 1067 ntBASIC16.96■□□□□ 0.31
LRRC28Q86X40 AC092368.3-202ENST00000574180 1591 ntBASIC16.96■□□□□ 0.31
LRRC28Q86X40 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms