Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 FZD10-202ENST00000539839 3282 ntBASIC16.86■□□□□ 0.29
RTTNQ86VV8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RTTNQ86VV8 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RTTNQ86VV8 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RTTNQ86VV8 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTTNQ86VV8 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
RTTNQ86VV8 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.86■□□□□ 0.29
RTTNQ86VV8 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.86■□□□□ 0.29
RTTNQ86VV8 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTTNQ86VV8 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTTNQ86VV8 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTTNQ86VV8 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
RTTNQ86VV8 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RTTNQ86VV8 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.86■□□□□ 0.29
RTTNQ86VV8 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.86■□□□□ 0.29
RTTNQ86VV8 AC004264.1-201ENST00000608354 794 ntBASIC16.86■□□□□ 0.29
RTTNQ86VV8 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTTNQ86VV8 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTTNQ86VV8 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTTNQ86VV8 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTTNQ86VV8 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTTNQ86VV8 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RTTNQ86VV8 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.86■□□□□ 0.29
RTTNQ86VV8 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTTNQ86VV8 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTTNQ86VV8 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
RTTNQ86VV8 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTTNQ86VV8 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.85■□□□□ 0.29
RTTNQ86VV8 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTTNQ86VV8 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RTTNQ86VV8 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTTNQ86VV8 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RTTNQ86VV8 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.85■□□□□ 0.29
RTTNQ86VV8 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RTTNQ86VV8 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.85■□□□□ 0.29
RTTNQ86VV8 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RTTNQ86VV8 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.85■□□□□ 0.29
RTTNQ86VV8 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.85■□□□□ 0.29
RTTNQ86VV8 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTTNQ86VV8 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RTTNQ86VV8 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTTNQ86VV8 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RTTNQ86VV8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTTNQ86VV8 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTTNQ86VV8 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTTNQ86VV8 SDHAP1-207ENST00000440850 2000 ntBASIC16.85■□□□□ 0.29
RTTNQ86VV8 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTTNQ86VV8 AP000974.1-201ENST00000623909 2387 ntBASIC16.85■□□□□ 0.29
RTTNQ86VV8 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.85■□□□□ 0.29
RTTNQ86VV8 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RTTNQ86VV8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.85■□□□□ 0.29
RTTNQ86VV8 MIR4785-201ENST00000585005 73 ntBASIC16.85■□□□□ 0.29
RTTNQ86VV8 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTTNQ86VV8 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTTNQ86VV8 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
RTTNQ86VV8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RTTNQ86VV8 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.85■□□□□ 0.29
RTTNQ86VV8 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTTNQ86VV8 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.85■□□□□ 0.29
RTTNQ86VV8 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTTNQ86VV8 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RTTNQ86VV8 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTTNQ86VV8 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTTNQ86VV8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RTTNQ86VV8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTTNQ86VV8 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTTNQ86VV8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTTNQ86VV8 RPS2P55-201ENST00000397318 883 ntBASIC16.84■□□□□ 0.29
RTTNQ86VV8 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
RTTNQ86VV8 AC107956.1-201ENST00000494359 873 ntBASIC16.84■□□□□ 0.29
RTTNQ86VV8 C1QL1P1-201ENST00000568105 661 ntBASIC16.84■□□□□ 0.29
RTTNQ86VV8 AC233702.5-201ENST00000584107 538 ntBASIC16.84■□□□□ 0.29
RTTNQ86VV8 NTF6B-201ENST00000591913 560 ntBASIC16.84■□□□□ 0.29
RTTNQ86VV8 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.84■□□□□ 0.29
RTTNQ86VV8 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTTNQ86VV8 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RTTNQ86VV8 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTTNQ86VV8 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.84■□□□□ 0.29
RTTNQ86VV8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.84■□□□□ 0.29
RTTNQ86VV8 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RTTNQ86VV8 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RTTNQ86VV8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTTNQ86VV8 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.84■□□□□ 0.29
RTTNQ86VV8 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTTNQ86VV8 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTTNQ86VV8 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTTNQ86VV8 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTTNQ86VV8 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.84■□□□□ 0.29
RTTNQ86VV8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTTNQ86VV8 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTTNQ86VV8 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.84■□□□□ 0.29
RTTNQ86VV8 KRT18P16-201ENST00000510337 1294 ntBASIC16.84■□□□□ 0.29
RTTNQ86VV8 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.84■□□□□ 0.29
RTTNQ86VV8 AP001412.1-201ENST00000608405 714 ntBASIC16.84■□□□□ 0.29
RTTNQ86VV8 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.84■□□□□ 0.29
RTTNQ86VV8 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.83■□□□□ 0.29
RTTNQ86VV8 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RTTNQ86VV8 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RTTNQ86VV8 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RTTNQ86VV8 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms