Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
LYSMD3Q7Z3D4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.21■□□□□ 0.67
LYSMD3Q7Z3D4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LYSMD3Q7Z3D4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
LYSMD3Q7Z3D4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LYSMD3Q7Z3D4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LYSMD3Q7Z3D4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LYSMD3Q7Z3D4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
LYSMD3Q7Z3D4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.21■□□□□ 0.67
LYSMD3Q7Z3D4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LYSMD3Q7Z3D4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LYSMD3Q7Z3D4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.21■□□□□ 0.67
LYSMD3Q7Z3D4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LYSMD3Q7Z3D4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.21■□□□□ 0.67
LYSMD3Q7Z3D4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LYSMD3Q7Z3D4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LYSMD3Q7Z3D4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LYSMD3Q7Z3D4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LYSMD3Q7Z3D4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LYSMD3Q7Z3D4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.21■□□□□ 0.67
LYSMD3Q7Z3D4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
LYSMD3Q7Z3D4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
LYSMD3Q7Z3D4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
LYSMD3Q7Z3D4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LYSMD3Q7Z3D4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LYSMD3Q7Z3D4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.2■□□□□ 0.66
LYSMD3Q7Z3D4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LYSMD3Q7Z3D4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.2■□□□□ 0.66
LYSMD3Q7Z3D4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
LYSMD3Q7Z3D4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LYSMD3Q7Z3D4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.2■□□□□ 0.66
LYSMD3Q7Z3D4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.2■□□□□ 0.66
LYSMD3Q7Z3D4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LYSMD3Q7Z3D4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
LYSMD3Q7Z3D4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.2■□□□□ 0.66
LYSMD3Q7Z3D4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.2■□□□□ 0.66
LYSMD3Q7Z3D4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.2■□□□□ 0.66
LYSMD3Q7Z3D4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.2■□□□□ 0.66
LYSMD3Q7Z3D4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LYSMD3Q7Z3D4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LYSMD3Q7Z3D4 AC130371.2-201ENST00000619443 611 ntBASIC19.2■□□□□ 0.66
LYSMD3Q7Z3D4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LYSMD3Q7Z3D4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LYSMD3Q7Z3D4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.2■□□□□ 0.66
LYSMD3Q7Z3D4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LYSMD3Q7Z3D4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LYSMD3Q7Z3D4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LYSMD3Q7Z3D4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.19■□□□□ 0.66
LYSMD3Q7Z3D4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.19■□□□□ 0.66
LYSMD3Q7Z3D4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LYSMD3Q7Z3D4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LYSMD3Q7Z3D4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LYSMD3Q7Z3D4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LYSMD3Q7Z3D4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
LYSMD3Q7Z3D4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LYSMD3Q7Z3D4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.19■□□□□ 0.66
LYSMD3Q7Z3D4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.19■□□□□ 0.66
LYSMD3Q7Z3D4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.19■□□□□ 0.66
LYSMD3Q7Z3D4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.19■□□□□ 0.66
LYSMD3Q7Z3D4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LYSMD3Q7Z3D4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.19■□□□□ 0.66
LYSMD3Q7Z3D4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.19■□□□□ 0.66
LYSMD3Q7Z3D4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.19■□□□□ 0.66
LYSMD3Q7Z3D4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.19■□□□□ 0.66
LYSMD3Q7Z3D4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
LYSMD3Q7Z3D4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LYSMD3Q7Z3D4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.19■□□□□ 0.66
LYSMD3Q7Z3D4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LYSMD3Q7Z3D4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.19■□□□□ 0.66
LYSMD3Q7Z3D4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.19■□□□□ 0.66
LYSMD3Q7Z3D4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.19■□□□□ 0.66
LYSMD3Q7Z3D4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LYSMD3Q7Z3D4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LYSMD3Q7Z3D4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LYSMD3Q7Z3D4 AC141586.3-201ENST00000562166 1838 ntBASIC19.18■□□□□ 0.66
LYSMD3Q7Z3D4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD3Q7Z3D4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD3Q7Z3D4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.18■□□□□ 0.66
LYSMD3Q7Z3D4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
LYSMD3Q7Z3D4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.18■□□□□ 0.66
LYSMD3Q7Z3D4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD3Q7Z3D4 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.18■□□□□ 0.66
LYSMD3Q7Z3D4 TSPY23P-201ENST00000440136 739 ntBASIC19.18■□□□□ 0.66
LYSMD3Q7Z3D4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.18■□□□□ 0.66
LYSMD3Q7Z3D4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
LYSMD3Q7Z3D4 AL355075.4-201ENST00000554988 638 ntBASIC19.18■□□□□ 0.66
LYSMD3Q7Z3D4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.18■□□□□ 0.66
LYSMD3Q7Z3D4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD3Q7Z3D4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.18■□□□□ 0.66
LYSMD3Q7Z3D4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD3Q7Z3D4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD3Q7Z3D4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD3Q7Z3D4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD3Q7Z3D4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD3Q7Z3D4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD3Q7Z3D4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD3Q7Z3D4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.18■□□□□ 0.66
LYSMD3Q7Z3D4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD3Q7Z3D4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LYSMD3Q7Z3D4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms