Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
H3F3CQ6NXT2 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.66■□□□□ 0.42
H3F3CQ6NXT2 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
H3F3CQ6NXT2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
H3F3CQ6NXT2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
H3F3CQ6NXT2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
H3F3CQ6NXT2 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
H3F3CQ6NXT2 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H3F3CQ6NXT2 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H3F3CQ6NXT2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
H3F3CQ6NXT2 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
H3F3CQ6NXT2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.65■□□□□ 0.42
H3F3CQ6NXT2 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
H3F3CQ6NXT2 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
H3F3CQ6NXT2 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
H3F3CQ6NXT2 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
H3F3CQ6NXT2 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
H3F3CQ6NXT2 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
H3F3CQ6NXT2 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
H3F3CQ6NXT2 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
H3F3CQ6NXT2 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
H3F3CQ6NXT2 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.65■□□□□ 0.42
H3F3CQ6NXT2 TSPY21P-201ENST00000433481 731 ntBASIC17.65■□□□□ 0.42
H3F3CQ6NXT2 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.65■□□□□ 0.42
H3F3CQ6NXT2 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.65■□□□□ 0.42
H3F3CQ6NXT2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
H3F3CQ6NXT2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
H3F3CQ6NXT2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H3F3CQ6NXT2 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
H3F3CQ6NXT2 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H3F3CQ6NXT2 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H3F3CQ6NXT2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
H3F3CQ6NXT2 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
H3F3CQ6NXT2 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.65■□□□□ 0.42
H3F3CQ6NXT2 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
H3F3CQ6NXT2 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
H3F3CQ6NXT2 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
H3F3CQ6NXT2 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
H3F3CQ6NXT2 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.64■□□□□ 0.42
H3F3CQ6NXT2 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H3F3CQ6NXT2 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H3F3CQ6NXT2 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H3F3CQ6NXT2 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
H3F3CQ6NXT2 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H3F3CQ6NXT2 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H3F3CQ6NXT2 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H3F3CQ6NXT2 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
H3F3CQ6NXT2 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
H3F3CQ6NXT2 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H3F3CQ6NXT2 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H3F3CQ6NXT2 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
H3F3CQ6NXT2 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.64■□□□□ 0.41
H3F3CQ6NXT2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.64■□□□□ 0.41
H3F3CQ6NXT2 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H3F3CQ6NXT2 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
H3F3CQ6NXT2 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H3F3CQ6NXT2 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.64■□□□□ 0.41
H3F3CQ6NXT2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.64■□□□□ 0.41
H3F3CQ6NXT2 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.64■□□□□ 0.41
H3F3CQ6NXT2 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H3F3CQ6NXT2 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
H3F3CQ6NXT2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.63■□□□□ 0.41
H3F3CQ6NXT2 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
H3F3CQ6NXT2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
H3F3CQ6NXT2 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.63■□□□□ 0.41
H3F3CQ6NXT2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.63■□□□□ 0.41
H3F3CQ6NXT2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
H3F3CQ6NXT2 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.63■□□□□ 0.41
H3F3CQ6NXT2 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
H3F3CQ6NXT2 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
H3F3CQ6NXT2 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.63■□□□□ 0.41
H3F3CQ6NXT2 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
H3F3CQ6NXT2 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.63■□□□□ 0.41
H3F3CQ6NXT2 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.63■□□□□ 0.41
H3F3CQ6NXT2 AP003041.3-201ENST00000527151 707 ntBASIC17.63■□□□□ 0.41
H3F3CQ6NXT2 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.63■□□□□ 0.41
H3F3CQ6NXT2 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
H3F3CQ6NXT2 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
H3F3CQ6NXT2 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
H3F3CQ6NXT2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.63■□□□□ 0.41
H3F3CQ6NXT2 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.63■□□□□ 0.41
H3F3CQ6NXT2 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.63■□□□□ 0.41
H3F3CQ6NXT2 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
H3F3CQ6NXT2 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
H3F3CQ6NXT2 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
H3F3CQ6NXT2 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
H3F3CQ6NXT2 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
H3F3CQ6NXT2 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.63■□□□□ 0.41
H3F3CQ6NXT2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
H3F3CQ6NXT2 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
H3F3CQ6NXT2 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
H3F3CQ6NXT2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
H3F3CQ6NXT2 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
H3F3CQ6NXT2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H3F3CQ6NXT2 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.62■□□□□ 0.41
H3F3CQ6NXT2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.62■□□□□ 0.41
H3F3CQ6NXT2 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.62■□□□□ 0.41
H3F3CQ6NXT2 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H3F3CQ6NXT2 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H3F3CQ6NXT2 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms