Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC24.11■■□□□ 1.45
RC3H1Q5TC82 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC24.11■■□□□ 1.45
RC3H1Q5TC82 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RC3H1Q5TC82 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC24.11■■□□□ 1.45
RC3H1Q5TC82 AC112497.1-201ENST00000624824 639 ntBASIC24.11■■□□□ 1.45
RC3H1Q5TC82 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
RC3H1Q5TC82 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RC3H1Q5TC82 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC24.11■■□□□ 1.45
RC3H1Q5TC82 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC24.11■■□□□ 1.45
RC3H1Q5TC82 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RC3H1Q5TC82 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RC3H1Q5TC82 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC24.11■■□□□ 1.45
RC3H1Q5TC82 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
RC3H1Q5TC82 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RC3H1Q5TC82 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC24.1■■□□□ 1.45
RC3H1Q5TC82 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RC3H1Q5TC82 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
RC3H1Q5TC82 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
RC3H1Q5TC82 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC24.1■■□□□ 1.45
RC3H1Q5TC82 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC24.1■■□□□ 1.45
RC3H1Q5TC82 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC24.1■■□□□ 1.45
RC3H1Q5TC82 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC24.1■■□□□ 1.45
RC3H1Q5TC82 AL031008.1-201ENST00000619963 541 ntBASIC24.1■■□□□ 1.45
RC3H1Q5TC82 GAS2L1P1-201ENST00000420145 1480 ntBASIC24.1■■□□□ 1.45
RC3H1Q5TC82 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC24.1■■□□□ 1.45
RC3H1Q5TC82 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RC3H1Q5TC82 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RC3H1Q5TC82 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RC3H1Q5TC82 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RC3H1Q5TC82 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RC3H1Q5TC82 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RC3H1Q5TC82 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
RC3H1Q5TC82 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC24.1■■□□□ 1.45
RC3H1Q5TC82 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RC3H1Q5TC82 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RC3H1Q5TC82 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RC3H1Q5TC82 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RC3H1Q5TC82 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC24.09■■□□□ 1.45
RC3H1Q5TC82 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC24.09■■□□□ 1.45
RC3H1Q5TC82 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC24.09■■□□□ 1.45
RC3H1Q5TC82 AL160237.2-201ENST00000556165 472 ntBASIC24.09■■□□□ 1.45
RC3H1Q5TC82 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
RC3H1Q5TC82 AL732292.2-201ENST00000609649 430 ntBASIC24.09■■□□□ 1.45
RC3H1Q5TC82 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC24.09■■□□□ 1.45
RC3H1Q5TC82 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC24.09■■□□□ 1.45
RC3H1Q5TC82 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC24.09■■□□□ 1.45
RC3H1Q5TC82 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC24.09■■□□□ 1.45
RC3H1Q5TC82 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RC3H1Q5TC82 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RC3H1Q5TC82 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC24.08■■□□□ 1.45
RC3H1Q5TC82 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC24.08■■□□□ 1.45
RC3H1Q5TC82 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
RC3H1Q5TC82 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
RC3H1Q5TC82 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC24.08■■□□□ 1.45
RC3H1Q5TC82 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
RC3H1Q5TC82 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RC3H1Q5TC82 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
RC3H1Q5TC82 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
RC3H1Q5TC82 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RC3H1Q5TC82 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC24.08■■□□□ 1.45
RC3H1Q5TC82 CIB2-208ENST00000560618 804 ntTSL 2 BASIC24.08■■□□□ 1.45
RC3H1Q5TC82 RNF126P1-202ENST00000569893 925 ntBASIC24.08■■□□□ 1.45
RC3H1Q5TC82 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
RC3H1Q5TC82 AL121772.3-201ENST00000610840 674 ntBASIC24.08■■□□□ 1.45
RC3H1Q5TC82 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
RC3H1Q5TC82 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
RC3H1Q5TC82 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
RC3H1Q5TC82 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC24.08■■□□□ 1.44
RC3H1Q5TC82 SDHAP1-207ENST00000440850 2000 ntBASIC24.08■■□□□ 1.44
RC3H1Q5TC82 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
RC3H1Q5TC82 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC24.08■■□□□ 1.44
RC3H1Q5TC82 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC24.08■■□□□ 1.44
RC3H1Q5TC82 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
RC3H1Q5TC82 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RC3H1Q5TC82 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC24.07■■□□□ 1.44
RC3H1Q5TC82 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC24.07■■□□□ 1.44
RC3H1Q5TC82 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC24.07■■□□□ 1.44
RC3H1Q5TC82 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RC3H1Q5TC82 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC24.07■■□□□ 1.44
RC3H1Q5TC82 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RC3H1Q5TC82 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
RC3H1Q5TC82 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RC3H1Q5TC82 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
RC3H1Q5TC82 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
RC3H1Q5TC82 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC24.07■■□□□ 1.44
RC3H1Q5TC82 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RC3H1Q5TC82 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
RC3H1Q5TC82 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RC3H1Q5TC82 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RC3H1Q5TC82 GOLGA6L5P-202ENST00000515341 1828 ntBASIC24.07■■□□□ 1.44
RC3H1Q5TC82 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC24.07■■□□□ 1.44
RC3H1Q5TC82 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC24.07■■□□□ 1.44
RC3H1Q5TC82 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RC3H1Q5TC82 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
RC3H1Q5TC82 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
RC3H1Q5TC82 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RC3H1Q5TC82 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RC3H1Q5TC82 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
RC3H1Q5TC82 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RC3H1Q5TC82 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms