Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
LDLRAP1Q5SW96 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.02■□□□□ 0.64
LDLRAP1Q5SW96 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
LDLRAP1Q5SW96 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
LDLRAP1Q5SW96 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LDLRAP1Q5SW96 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
LDLRAP1Q5SW96 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
LDLRAP1Q5SW96 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LDLRAP1Q5SW96 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.02■□□□□ 0.64
LDLRAP1Q5SW96 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
LDLRAP1Q5SW96 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LDLRAP1Q5SW96 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LDLRAP1Q5SW96 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LDLRAP1Q5SW96 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LDLRAP1Q5SW96 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.02■□□□□ 0.64
LDLRAP1Q5SW96 MESTP1-201ENST00000404287 994 ntBASIC19.02■□□□□ 0.64
LDLRAP1Q5SW96 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.02■□□□□ 0.64
LDLRAP1Q5SW96 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LDLRAP1Q5SW96 AC011506.1-201ENST00000474329 610 ntBASIC19.02■□□□□ 0.64
LDLRAP1Q5SW96 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.02■□□□□ 0.64
LDLRAP1Q5SW96 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.02■□□□□ 0.64
LDLRAP1Q5SW96 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.02■□□□□ 0.64
LDLRAP1Q5SW96 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
LDLRAP1Q5SW96 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
LDLRAP1Q5SW96 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.63
LDLRAP1Q5SW96 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.02■□□□□ 0.63
LDLRAP1Q5SW96 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LDLRAP1Q5SW96 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LDLRAP1Q5SW96 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LDLRAP1Q5SW96 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.02■□□□□ 0.63
LDLRAP1Q5SW96 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
LDLRAP1Q5SW96 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LDLRAP1Q5SW96 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LDLRAP1Q5SW96 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LDLRAP1Q5SW96 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
LDLRAP1Q5SW96 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
LDLRAP1Q5SW96 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.01■□□□□ 0.63
LDLRAP1Q5SW96 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LDLRAP1Q5SW96 AC093484.2-201ENST00000580996 2166 ntBASIC19.01■□□□□ 0.63
LDLRAP1Q5SW96 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
LDLRAP1Q5SW96 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.01■□□□□ 0.63
LDLRAP1Q5SW96 AC091390.4-202ENST00000476426 537 ntBASIC19.01■□□□□ 0.63
LDLRAP1Q5SW96 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
LDLRAP1Q5SW96 DGCR10-201ENST00000609839 495 ntBASIC19.01■□□□□ 0.63
LDLRAP1Q5SW96 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
LDLRAP1Q5SW96 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LDLRAP1Q5SW96 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LDLRAP1Q5SW96 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.01■□□□□ 0.63
LDLRAP1Q5SW96 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LDLRAP1Q5SW96 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LDLRAP1Q5SW96 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
LDLRAP1Q5SW96 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.01■□□□□ 0.63
LDLRAP1Q5SW96 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.01■□□□□ 0.63
LDLRAP1Q5SW96 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19■□□□□ 0.63
LDLRAP1Q5SW96 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19■□□□□ 0.63
LDLRAP1Q5SW96 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LDLRAP1Q5SW96 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19■□□□□ 0.63
LDLRAP1Q5SW96 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
LDLRAP1Q5SW96 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19■□□□□ 0.63
LDLRAP1Q5SW96 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LDLRAP1Q5SW96 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LDLRAP1Q5SW96 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19■□□□□ 0.63
LDLRAP1Q5SW96 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
LDLRAP1Q5SW96 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19■□□□□ 0.63
LDLRAP1Q5SW96 TSPY21P-201ENST00000433481 731 ntBASIC19■□□□□ 0.63
LDLRAP1Q5SW96 FAM207BP-201ENST00000447172 505 ntBASIC19■□□□□ 0.63
LDLRAP1Q5SW96 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19■□□□□ 0.63
LDLRAP1Q5SW96 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
LDLRAP1Q5SW96 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LDLRAP1Q5SW96 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19■□□□□ 0.63
LDLRAP1Q5SW96 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
LDLRAP1Q5SW96 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LDLRAP1Q5SW96 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
LDLRAP1Q5SW96 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LDLRAP1Q5SW96 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LDLRAP1Q5SW96 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
LDLRAP1Q5SW96 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
LDLRAP1Q5SW96 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LDLRAP1Q5SW96 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19■□□□□ 0.63
LDLRAP1Q5SW96 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LDLRAP1Q5SW96 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19■□□□□ 0.63
LDLRAP1Q5SW96 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LDLRAP1Q5SW96 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LDLRAP1Q5SW96 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.99■□□□□ 0.63
LDLRAP1Q5SW96 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LDLRAP1Q5SW96 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.99■□□□□ 0.63
LDLRAP1Q5SW96 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.99■□□□□ 0.63
LDLRAP1Q5SW96 UNC93B2-201ENST00000285383 730 ntBASIC18.99■□□□□ 0.63
LDLRAP1Q5SW96 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
LDLRAP1Q5SW96 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.99■□□□□ 0.63
LDLRAP1Q5SW96 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.99■□□□□ 0.63
LDLRAP1Q5SW96 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LDLRAP1Q5SW96 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.99■□□□□ 0.63
LDLRAP1Q5SW96 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.99■□□□□ 0.63
LDLRAP1Q5SW96 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.99■□□□□ 0.63
LDLRAP1Q5SW96 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.99■□□□□ 0.63
LDLRAP1Q5SW96 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.99■□□□□ 0.63
LDLRAP1Q5SW96 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
LDLRAP1Q5SW96 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
LDLRAP1Q5SW96 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms