Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.43■□□□□ 0.38
CXCR4P61073 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.43■□□□□ 0.38
CXCR4P61073 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.43■□□□□ 0.38
CXCR4P61073 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.43■□□□□ 0.38
CXCR4P61073 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXCR4P61073 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXCR4P61073 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.43■□□□□ 0.38
CXCR4P61073 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.43■□□□□ 0.38
CXCR4P61073 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.43■□□□□ 0.38
CXCR4P61073 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CXCR4P61073 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CXCR4P61073 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXCR4P61073 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXCR4P61073 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.42■□□□□ 0.38
CXCR4P61073 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CXCR4P61073 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.42■□□□□ 0.38
CXCR4P61073 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CXCR4P61073 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXCR4P61073 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.42■□□□□ 0.38
CXCR4P61073 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXCR4P61073 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXCR4P61073 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.42■□□□□ 0.38
CXCR4P61073 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXCR4P61073 CYP2T1P-201ENST00000432607 1285 ntBASIC17.42■□□□□ 0.38
CXCR4P61073 AC008694.1-202ENST00000636953 945 ntBASIC17.42■□□□□ 0.38
CXCR4P61073 AC083906.6-201ENST00000641366 219 ntBASIC17.42■□□□□ 0.38
CXCR4P61073 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXCR4P61073 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.42■□□□□ 0.38
CXCR4P61073 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXCR4P61073 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXCR4P61073 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.42■□□□□ 0.38
CXCR4P61073 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
CXCR4P61073 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CXCR4P61073 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CXCR4P61073 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
CXCR4P61073 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CXCR4P61073 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.42■□□□□ 0.38
CXCR4P61073 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXCR4P61073 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.42■□□□□ 0.38
CXCR4P61073 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXCR4P61073 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXCR4P61073 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXCR4P61073 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.41■□□□□ 0.38
CXCR4P61073 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
CXCR4P61073 FEM1AP3-201ENST00000403722 1741 ntBASIC17.41■□□□□ 0.38
CXCR4P61073 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXCR4P61073 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CXCR4P61073 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXCR4P61073 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXCR4P61073 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.41■□□□□ 0.38
CXCR4P61073 AC087623.3-201ENST00000607047 1098 ntBASIC17.41■□□□□ 0.38
CXCR4P61073 AC011767.1-201ENST00000617410 1153 ntBASIC17.41■□□□□ 0.38
CXCR4P61073 MIR6821-201ENST00000617625 74 ntBASIC17.41■□□□□ 0.38
CXCR4P61073 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXCR4P61073 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXCR4P61073 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CXCR4P61073 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CXCR4P61073 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXCR4P61073 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.41■□□□□ 0.38
CXCR4P61073 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CXCR4P61073 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.41■□□□□ 0.38
CXCR4P61073 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
CXCR4P61073 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXCR4P61073 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.41■□□□□ 0.38
CXCR4P61073 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.4■□□□□ 0.38
CXCR4P61073 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CXCR4P61073 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CXCR4P61073 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CXCR4P61073 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CXCR4P61073 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CXCR4P61073 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CXCR4P61073 ESPNP-201ENST00000270691 2015 ntBASIC17.4■□□□□ 0.38
CXCR4P61073 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CXCR4P61073 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CXCR4P61073 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CXCR4P61073 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CXCR4P61073 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CXCR4P61073 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CXCR4P61073 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CXCR4P61073 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.4■□□□□ 0.38
CXCR4P61073 KRT18P5-201ENST00000436075 1291 ntBASIC17.4■□□□□ 0.38
CXCR4P61073 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.4■□□□□ 0.38
CXCR4P61073 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CXCR4P61073 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CXCR4P61073 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CXCR4P61073 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CXCR4P61073 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.4■□□□□ 0.38
CXCR4P61073 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CXCR4P61073 AC104417.2-201ENST00000562989 1793 ntBASIC17.4■□□□□ 0.38
CXCR4P61073 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CXCR4P61073 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.4■□□□□ 0.38
CXCR4P61073 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.4■□□□□ 0.38
CXCR4P61073 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.4■□□□□ 0.38
CXCR4P61073 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.4■□□□□ 0.38
CXCR4P61073 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CXCR4P61073 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CXCR4P61073 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CXCR4P61073 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.39■□□□□ 0.37
CXCR4P61073 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CXCR4P61073 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms