Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC15.54■□□□□ 0.08
SPCS3P61009 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SPCS3P61009 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC15.54■□□□□ 0.08
SPCS3P61009 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SPCS3P61009 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SPCS3P61009 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SPCS3P61009 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SPCS3P61009 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SPCS3P61009 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SPCS3P61009 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SPCS3P61009 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SPCS3P61009 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SPCS3P61009 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SPCS3P61009 PCDHB18P-201ENST00000524813 2368 ntBASIC15.53■□□□□ 0.08
SPCS3P61009 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SPCS3P61009 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SPCS3P61009 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SPCS3P61009 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
SPCS3P61009 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC15.53■□□□□ 0.08
SPCS3P61009 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SPCS3P61009 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC15.53■□□□□ 0.08
SPCS3P61009 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SPCS3P61009 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SPCS3P61009 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SPCS3P61009 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC15.53■□□□□ 0.08
SPCS3P61009 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SPCS3P61009 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SPCS3P61009 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC15.53■□□□□ 0.08
SPCS3P61009 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC15.53■□□□□ 0.08
SPCS3P61009 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SPCS3P61009 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SPCS3P61009 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SPCS3P61009 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SPCS3P61009 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SPCS3P61009 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SPCS3P61009 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
SPCS3P61009 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
SPCS3P61009 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SPCS3P61009 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SPCS3P61009 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.52■□□□□ 0.08
SPCS3P61009 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
SPCS3P61009 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SPCS3P61009 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC15.52■□□□□ 0.08
SPCS3P61009 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SPCS3P61009 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
SPCS3P61009 AC073210.2-201ENST00000430369 194 ntBASIC15.52■□□□□ 0.08
SPCS3P61009 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC15.52■□□□□ 0.08
SPCS3P61009 AC005181.1-201ENST00000604782 1256 ntBASIC15.52■□□□□ 0.08
SPCS3P61009 MAZ-216ENST00000616501 991 ntTSL 5 BASIC15.52■□□□□ 0.08
SPCS3P61009 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
SPCS3P61009 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SPCS3P61009 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15.52■□□□□ 0.07
SPCS3P61009 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SPCS3P61009 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SPCS3P61009 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SPCS3P61009 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
SPCS3P61009 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.07
SPCS3P61009 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SPCS3P61009 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SPCS3P61009 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SPCS3P61009 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
SPCS3P61009 AC079598.2-202ENST00000546624 1451 ntBASIC15.52■□□□□ 0.07
SPCS3P61009 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SPCS3P61009 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SPCS3P61009 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SPCS3P61009 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
SPCS3P61009 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SPCS3P61009 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SPCS3P61009 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
SPCS3P61009 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SPCS3P61009 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
SPCS3P61009 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SPCS3P61009 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SPCS3P61009 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
SPCS3P61009 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
SPCS3P61009 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SPCS3P61009 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
SPCS3P61009 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SPCS3P61009 ME3-201ENST00000323418 1068 ntTSL 5 BASIC15.51■□□□□ 0.07
SPCS3P61009 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC15.51■□□□□ 0.07
SPCS3P61009 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC15.51■□□□□ 0.07
SPCS3P61009 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC15.51■□□□□ 0.07
SPCS3P61009 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SPCS3P61009 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
SPCS3P61009 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SPCS3P61009 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SPCS3P61009 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC15.51■□□□□ 0.07
SPCS3P61009 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
SPCS3P61009 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
SPCS3P61009 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SPCS3P61009 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SPCS3P61009 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SPCS3P61009 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
SPCS3P61009 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.51■□□□□ 0.07
SPCS3P61009 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC15.5■□□□□ 0.07
SPCS3P61009 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SPCS3P61009 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SPCS3P61009 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SPCS3P61009 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SPCS3P61009 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms