Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
CLDN12P56749 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN12P56749 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN12P56749 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CLDN12P56749 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
CLDN12P56749 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CLDN12P56749 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN12P56749 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN12P56749 AC104417.2-201ENST00000562989 1793 ntBASIC16.62■□□□□ 0.25
CLDN12P56749 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDN12P56749 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
CLDN12P56749 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN12P56749 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN12P56749 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN12P56749 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN12P56749 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN12P56749 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN12P56749 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN12P56749 LGR4-203ENST00000480977 492 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN12P56749 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.62■□□□□ 0.25
CLDN12P56749 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN12P56749 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CLDN12P56749 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN12P56749 AC008694.1-202ENST00000636953 945 ntBASIC16.62■□□□□ 0.25
CLDN12P56749 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN12P56749 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN12P56749 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDN12P56749 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN12P56749 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CLDN12P56749 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN12P56749 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN12P56749 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CLDN12P56749 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN12P56749 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN12P56749 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN12P56749 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN12P56749 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN12P56749 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN12P56749 AC010980.2-201ENST00000587099 1412 ntBASIC16.62■□□□□ 0.25
CLDN12P56749 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.61■□□□□ 0.25
CLDN12P56749 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN12P56749 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN12P56749 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN12P56749 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.61■□□□□ 0.25
CLDN12P56749 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN12P56749 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
CLDN12P56749 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN12P56749 NOC2LP2-201ENST00000407594 1944 ntBASIC16.61■□□□□ 0.25
CLDN12P56749 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN12P56749 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CLDN12P56749 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN12P56749 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN12P56749 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN12P56749 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CLDN12P56749 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN12P56749 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN12P56749 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.61■□□□□ 0.25
CLDN12P56749 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.61■□□□□ 0.25
CLDN12P56749 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN12P56749 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN12P56749 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN12P56749 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN12P56749 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN12P56749 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.61■□□□□ 0.25
CLDN12P56749 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.61■□□□□ 0.25
CLDN12P56749 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN12P56749 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.61■□□□□ 0.25
CLDN12P56749 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN12P56749 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CLDN12P56749 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN12P56749 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CLDN12P56749 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN12P56749 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN12P56749 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
CLDN12P56749 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN12P56749 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN12P56749 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN12P56749 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CLDN12P56749 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CLDN12P56749 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN12P56749 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN12P56749 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN12P56749 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CLDN12P56749 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN12P56749 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN12P56749 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN12P56749 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN12P56749 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDN12P56749 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN12P56749 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CLDN12P56749 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CLDN12P56749 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.6■□□□□ 0.25
CLDN12P56749 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN12P56749 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN12P56749 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.6■□□□□ 0.25
CLDN12P56749 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC16.6■□□□□ 0.25
CLDN12P56749 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CLDN12P56749 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDN12P56749 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.6■□□□□ 0.25
CLDN12P56749 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms