Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.08■□□□□ 0.96
PEX3P56589 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PEX3P56589 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PEX3P56589 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.07■□□□□ 0.96
PEX3P56589 CYP2D8P-201ENST00000433633 1490 ntBASIC21.07■□□□□ 0.96
PEX3P56589 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PEX3P56589 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PEX3P56589 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.07■□□□□ 0.96
PEX3P56589 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
PEX3P56589 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.07■□□□□ 0.96
PEX3P56589 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.07■□□□□ 0.96
PEX3P56589 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PEX3P56589 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PEX3P56589 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.07■□□□□ 0.96
PEX3P56589 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PEX3P56589 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PEX3P56589 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PEX3P56589 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PEX3P56589 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.07■□□□□ 0.96
PEX3P56589 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PEX3P56589 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PEX3P56589 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.06■□□□□ 0.96
PEX3P56589 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
PEX3P56589 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PEX3P56589 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.06■□□□□ 0.96
PEX3P56589 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PEX3P56589 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.06■□□□□ 0.96
PEX3P56589 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
PEX3P56589 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PEX3P56589 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.06■□□□□ 0.96
PEX3P56589 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.06■□□□□ 0.96
PEX3P56589 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PEX3P56589 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
PEX3P56589 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PEX3P56589 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.06■□□□□ 0.96
PEX3P56589 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.06■□□□□ 0.96
PEX3P56589 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.06■□□□□ 0.96
PEX3P56589 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PEX3P56589 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
PEX3P56589 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PEX3P56589 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PEX3P56589 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.05■□□□□ 0.96
PEX3P56589 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PEX3P56589 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PEX3P56589 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PEX3P56589 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.05■□□□□ 0.96
PEX3P56589 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PEX3P56589 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.05■□□□□ 0.96
PEX3P56589 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.05■□□□□ 0.96
PEX3P56589 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.05■□□□□ 0.96
PEX3P56589 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
PEX3P56589 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PEX3P56589 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PEX3P56589 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PEX3P56589 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PEX3P56589 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
PEX3P56589 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PEX3P56589 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PEX3P56589 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PEX3P56589 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.04■□□□□ 0.96
PEX3P56589 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PEX3P56589 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PEX3P56589 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PEX3P56589 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.04■□□□□ 0.96
PEX3P56589 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.04■□□□□ 0.96
PEX3P56589 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.04■□□□□ 0.96
PEX3P56589 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PEX3P56589 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.04■□□□□ 0.96
PEX3P56589 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.04■□□□□ 0.96
PEX3P56589 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.04■□□□□ 0.96
PEX3P56589 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PEX3P56589 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PEX3P56589 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PEX3P56589 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PEX3P56589 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PEX3P56589 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.04■□□□□ 0.96
PEX3P56589 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
PEX3P56589 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
PEX3P56589 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.04■□□□□ 0.96
PEX3P56589 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
PEX3P56589 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PEX3P56589 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.04■□□□□ 0.96
PEX3P56589 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
PEX3P56589 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
PEX3P56589 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PEX3P56589 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PEX3P56589 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
PEX3P56589 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PEX3P56589 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.03■□□□□ 0.96
PEX3P56589 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
PEX3P56589 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PEX3P56589 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PEX3P56589 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PEX3P56589 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.03■□□□□ 0.96
PEX3P56589 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
PEX3P56589 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.03■□□□□ 0.96
PEX3P56589 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.03■□□□□ 0.96
PEX3P56589 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.03■□□□□ 0.96
PEX3P56589 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PEX3P56589 AC010947.1-201ENST00000623454 693 ntBASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms