Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.72■□□□□ 0.75
PMS2P54278 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.72■□□□□ 0.75
PMS2P54278 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PMS2P54278 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
PMS2P54278 TFP1-202ENST00000475455 1573 ntBASIC19.72■□□□□ 0.75
PMS2P54278 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.72■□□□□ 0.75
PMS2P54278 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PMS2P54278 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PMS2P54278 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.72■□□□□ 0.75
PMS2P54278 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PMS2P54278 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PMS2P54278 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.72■□□□□ 0.75
PMS2P54278 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.72■□□□□ 0.75
PMS2P54278 AC008694.1-202ENST00000636953 945 ntBASIC19.72■□□□□ 0.75
PMS2P54278 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PMS2P54278 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.72■□□□□ 0.75
PMS2P54278 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.72■□□□□ 0.75
PMS2P54278 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PMS2P54278 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.72■□□□□ 0.75
PMS2P54278 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PMS2P54278 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PMS2P54278 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.71■□□□□ 0.75
PMS2P54278 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PMS2P54278 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PMS2P54278 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PMS2P54278 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
PMS2P54278 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PMS2P54278 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
PMS2P54278 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.71■□□□□ 0.75
PMS2P54278 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PMS2P54278 NOC2LP2-201ENST00000407594 1944 ntBASIC19.71■□□□□ 0.75
PMS2P54278 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PMS2P54278 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PMS2P54278 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.71■□□□□ 0.75
PMS2P54278 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PMS2P54278 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.71■□□□□ 0.75
PMS2P54278 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PMS2P54278 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.71■□□□□ 0.75
PMS2P54278 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.71■□□□□ 0.75
PMS2P54278 RNA5SP413-201ENST00000516373 109 ntBASIC19.71■□□□□ 0.75
PMS2P54278 AC069236.1-201ENST00000604339 616 ntBASIC19.71■□□□□ 0.75
PMS2P54278 ITM2C-210ENST00000620962 501 ntBASIC19.71■□□□□ 0.75
PMS2P54278 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PMS2P54278 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PMS2P54278 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PMS2P54278 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.71■□□□□ 0.75
PMS2P54278 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.71■□□□□ 0.75
PMS2P54278 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PMS2P54278 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PMS2P54278 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PMS2P54278 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PMS2P54278 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.7■□□□□ 0.74
PMS2P54278 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PMS2P54278 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
PMS2P54278 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PMS2P54278 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.7■□□□□ 0.74
PMS2P54278 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.7■□□□□ 0.74
PMS2P54278 SDHAP1-207ENST00000440850 2000 ntBASIC19.7■□□□□ 0.74
PMS2P54278 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PMS2P54278 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PMS2P54278 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PMS2P54278 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.7■□□□□ 0.74
PMS2P54278 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PMS2P54278 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.7■□□□□ 0.74
PMS2P54278 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.7■□□□□ 0.74
PMS2P54278 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.7■□□□□ 0.74
PMS2P54278 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.7■□□□□ 0.74
PMS2P54278 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
PMS2P54278 AC008687.6-201ENST00000596318 630 ntBASIC19.7■□□□□ 0.74
PMS2P54278 AC092118.2-201ENST00000613495 667 ntBASIC19.7■□□□□ 0.74
PMS2P54278 AL589743.5-201ENST00000616611 1050 ntBASIC19.7■□□□□ 0.74
PMS2P54278 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.7■□□□□ 0.74
PMS2P54278 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PMS2P54278 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PMS2P54278 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PMS2P54278 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.7■□□□□ 0.74
PMS2P54278 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PMS2P54278 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.7■□□□□ 0.74
PMS2P54278 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PMS2P54278 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PMS2P54278 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
PMS2P54278 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PMS2P54278 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PMS2P54278 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.69■□□□□ 0.74
PMS2P54278 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PMS2P54278 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PMS2P54278 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PMS2P54278 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PMS2P54278 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.69■□□□□ 0.74
PMS2P54278 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PMS2P54278 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.69■□□□□ 0.74
PMS2P54278 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PMS2P54278 AC093827.2-201ENST00000512654 315 ntBASIC19.69■□□□□ 0.74
PMS2P54278 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PMS2P54278 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.69■□□□□ 0.74
PMS2P54278 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PMS2P54278 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PMS2P54278 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PMS2P54278 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.69■□□□□ 0.74
PMS2P54278 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms