Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EPHA3P29320 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EPHA3P29320 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.6■□□□□ 0.57
EPHA3P29320 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.6■□□□□ 0.57
EPHA3P29320 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
EPHA3P29320 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.6■□□□□ 0.57
EPHA3P29320 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
EPHA3P29320 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
EPHA3P29320 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.6■□□□□ 0.57
EPHA3P29320 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPHA3P29320 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPHA3P29320 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.6■□□□□ 0.57
EPHA3P29320 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPHA3P29320 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
EPHA3P29320 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
EPHA3P29320 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EPHA3P29320 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPHA3P29320 MKRN4P-201ENST00000444706 1521 ntBASIC18.59■□□□□ 0.57
EPHA3P29320 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
EPHA3P29320 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.59■□□□□ 0.57
EPHA3P29320 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPHA3P29320 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
EPHA3P29320 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
EPHA3P29320 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
EPHA3P29320 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
EPHA3P29320 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPHA3P29320 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EPHA3P29320 PCDHB18P-201ENST00000524813 2368 ntBASIC18.59■□□□□ 0.57
EPHA3P29320 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
EPHA3P29320 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.59■□□□□ 0.57
EPHA3P29320 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.59■□□□□ 0.57
EPHA3P29320 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.59■□□□□ 0.57
EPHA3P29320 BX276092.2-201ENST00000417668 665 ntBASIC18.59■□□□□ 0.57
EPHA3P29320 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.59■□□□□ 0.57
EPHA3P29320 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPHA3P29320 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.59■□□□□ 0.57
EPHA3P29320 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPHA3P29320 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPHA3P29320 AC006557.6-201ENST00000623071 864 ntBASIC18.59■□□□□ 0.57
EPHA3P29320 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EPHA3P29320 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.59■□□□□ 0.57
EPHA3P29320 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPHA3P29320 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPHA3P29320 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.59■□□□□ 0.57
EPHA3P29320 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EPHA3P29320 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPHA3P29320 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EPHA3P29320 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPHA3P29320 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
EPHA3P29320 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
EPHA3P29320 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
EPHA3P29320 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.59■□□□□ 0.57
EPHA3P29320 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.58■□□□□ 0.57
EPHA3P29320 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
EPHA3P29320 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
EPHA3P29320 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
EPHA3P29320 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
EPHA3P29320 FEM1AP3-201ENST00000403722 1741 ntBASIC18.58■□□□□ 0.57
EPHA3P29320 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
EPHA3P29320 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
EPHA3P29320 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
EPHA3P29320 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
EPHA3P29320 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
EPHA3P29320 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
EPHA3P29320 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
EPHA3P29320 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.58■□□□□ 0.56
EPHA3P29320 RPS2P52-201ENST00000469610 820 ntBASIC18.58■□□□□ 0.56
EPHA3P29320 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.58■□□□□ 0.56
EPHA3P29320 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
EPHA3P29320 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
EPHA3P29320 NOC2LP1-202ENST00000452600 2235 ntBASIC18.58■□□□□ 0.56
EPHA3P29320 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
EPHA3P29320 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.58■□□□□ 0.56
EPHA3P29320 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.58■□□□□ 0.56
EPHA3P29320 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
EPHA3P29320 AP006587.1-201ENST00000534129 1502 ntBASIC18.58■□□□□ 0.56
EPHA3P29320 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
EPHA3P29320 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.58■□□□□ 0.56
EPHA3P29320 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
EPHA3P29320 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
EPHA3P29320 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EPHA3P29320 ANO7L1-203ENST00000602586 1720 ntBASIC18.57■□□□□ 0.56
EPHA3P29320 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EPHA3P29320 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EPHA3P29320 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EPHA3P29320 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
EPHA3P29320 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
EPHA3P29320 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
EPHA3P29320 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
EPHA3P29320 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.57■□□□□ 0.56
EPHA3P29320 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.57■□□□□ 0.56
EPHA3P29320 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.57■□□□□ 0.56
EPHA3P29320 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
EPHA3P29320 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.57■□□□□ 0.56
EPHA3P29320 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.57■□□□□ 0.56
EPHA3P29320 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
EPHA3P29320 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
EPHA3P29320 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
EPHA3P29320 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EPHA3P29320 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms