Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MMP8P22894 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
MMP8P22894 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
MMP8P22894 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MMP8P22894 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
MMP8P22894 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MMP8P22894 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MMP8P22894 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.12■□□□□ 0.81
MMP8P22894 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.12■□□□□ 0.81
MMP8P22894 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
MMP8P22894 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MMP8P22894 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MMP8P22894 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
MMP8P22894 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
MMP8P22894 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
MMP8P22894 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MMP8P22894 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
MMP8P22894 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MMP8P22894 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MMP8P22894 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
MMP8P22894 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MMP8P22894 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MMP8P22894 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MMP8P22894 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
MMP8P22894 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.11■□□□□ 0.81
MMP8P22894 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
MMP8P22894 AC004951.3-201ENST00000418645 1148 ntBASIC20.11■□□□□ 0.81
MMP8P22894 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MMP8P22894 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
MMP8P22894 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.11■□□□□ 0.81
MMP8P22894 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
MMP8P22894 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.81
MMP8P22894 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MMP8P22894 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
MMP8P22894 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MMP8P22894 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MMP8P22894 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
MMP8P22894 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MMP8P22894 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.1■□□□□ 0.81
MMP8P22894 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MMP8P22894 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MMP8P22894 AC008040.2-201ENST00000461049 708 ntBASIC20.1■□□□□ 0.81
MMP8P22894 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.1■□□□□ 0.81
MMP8P22894 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.1■□□□□ 0.81
MMP8P22894 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.1■□□□□ 0.81
MMP8P22894 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
MMP8P22894 AC130371.2-201ENST00000619443 611 ntBASIC20.1■□□□□ 0.81
MMP8P22894 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MMP8P22894 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MMP8P22894 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
MMP8P22894 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.1■□□□□ 0.81
MMP8P22894 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.1■□□□□ 0.81
MMP8P22894 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MMP8P22894 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MMP8P22894 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MMP8P22894 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
MMP8P22894 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MMP8P22894 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MMP8P22894 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MMP8P22894 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MMP8P22894 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MMP8P22894 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
MMP8P22894 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MMP8P22894 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
MMP8P22894 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
MMP8P22894 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.09■□□□□ 0.81
MMP8P22894 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MMP8P22894 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.09■□□□□ 0.81
MMP8P22894 RPS2P55-201ENST00000397318 883 ntBASIC20.09■□□□□ 0.81
MMP8P22894 AC011506.1-201ENST00000474329 610 ntBASIC20.09■□□□□ 0.81
MMP8P22894 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MMP8P22894 AC107956.1-201ENST00000494359 873 ntBASIC20.09■□□□□ 0.81
MMP8P22894 PRSS44-201ENST00000515154 1146 ntBASIC20.09■□□□□ 0.81
MMP8P22894 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MMP8P22894 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
MMP8P22894 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MMP8P22894 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MMP8P22894 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MMP8P22894 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.09■□□□□ 0.81
MMP8P22894 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.09■□□□□ 0.81
MMP8P22894 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.09■□□□□ 0.81
MMP8P22894 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MMP8P22894 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
MMP8P22894 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.08■□□□□ 0.81
MMP8P22894 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MMP8P22894 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MMP8P22894 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MMP8P22894 MESTP1-201ENST00000404287 994 ntBASIC20.08■□□□□ 0.81
MMP8P22894 FAM197Y1-201ENST00000421178 764 ntBASIC20.08■□□□□ 0.81
MMP8P22894 B3GAT3P1-201ENST00000471720 806 ntBASIC20.08■□□□□ 0.81
MMP8P22894 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.08■□□□□ 0.81
MMP8P22894 CD177P1-201ENST00000606252 935 ntBASIC20.08■□□□□ 0.81
MMP8P22894 AC011298.2-201ENST00000617989 482 ntBASIC20.08■□□□□ 0.81
MMP8P22894 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.08■□□□□ 0.81
MMP8P22894 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.08■□□□□ 0.81
MMP8P22894 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MMP8P22894 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MMP8P22894 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
MMP8P22894 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
MMP8P22894 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms