Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RFX1P22670 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.8■□□□□ 0.92
RFX1P22670 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.8■□□□□ 0.92
RFX1P22670 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFX1P22670 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
RFX1P22670 AC087289.5-201ENST00000586076 3175 ntBASIC20.8■□□□□ 0.92
RFX1P22670 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFX1P22670 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RFX1P22670 SDHAP1-207ENST00000440850 2000 ntBASIC20.8■□□□□ 0.92
RFX1P22670 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFX1P22670 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFX1P22670 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RFX1P22670 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RFX1P22670 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFX1P22670 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
RFX1P22670 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RFX1P22670 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFX1P22670 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFX1P22670 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFX1P22670 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
RFX1P22670 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
RFX1P22670 FAM197Y1-201ENST00000421178 764 ntBASIC20.79■□□□□ 0.92
RFX1P22670 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFX1P22670 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RFX1P22670 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.79■□□□□ 0.92
RFX1P22670 AF186192.3-201ENST00000583427 947 ntBASIC20.79■□□□□ 0.92
RFX1P22670 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.79■□□□□ 0.92
RFX1P22670 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RFX1P22670 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFX1P22670 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RFX1P22670 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.79■□□□□ 0.92
RFX1P22670 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.79■□□□□ 0.92
RFX1P22670 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFX1P22670 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFX1P22670 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.79■□□□□ 0.92
RFX1P22670 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RFX1P22670 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RFX1P22670 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
RFX1P22670 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RFX1P22670 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.78■□□□□ 0.92
RFX1P22670 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RFX1P22670 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RFX1P22670 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.78■□□□□ 0.92
RFX1P22670 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RFX1P22670 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.78■□□□□ 0.92
RFX1P22670 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.78■□□□□ 0.92
RFX1P22670 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFX1P22670 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFX1P22670 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFX1P22670 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
RFX1P22670 NBPF21P-201ENST00000425093 1451 ntBASIC20.78■□□□□ 0.92
RFX1P22670 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.78■□□□□ 0.92
RFX1P22670 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFX1P22670 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFX1P22670 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFX1P22670 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RFX1P22670 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFX1P22670 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFX1P22670 AC004264.1-201ENST00000608354 794 ntBASIC20.78■□□□□ 0.92
RFX1P22670 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.78■□□□□ 0.92
RFX1P22670 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.78■□□□□ 0.92
RFX1P22670 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.78■□□□□ 0.92
RFX1P22670 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.78■□□□□ 0.92
RFX1P22670 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.78■□□□□ 0.92
RFX1P22670 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RFX1P22670 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFX1P22670 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFX1P22670 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFX1P22670 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.78■□□□□ 0.92
RFX1P22670 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.78■□□□□ 0.92
RFX1P22670 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFX1P22670 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.78■□□□□ 0.92
RFX1P22670 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RFX1P22670 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.78■□□□□ 0.92
RFX1P22670 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFX1P22670 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RFX1P22670 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFX1P22670 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.78■□□□□ 0.92
RFX1P22670 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFX1P22670 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.77■□□□□ 0.92
RFX1P22670 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
RFX1P22670 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.77■□□□□ 0.92
RFX1P22670 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RFX1P22670 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFX1P22670 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFX1P22670 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.77■□□□□ 0.92
RFX1P22670 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
RFX1P22670 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RFX1P22670 C1QL1P1-201ENST00000568105 661 ntBASIC20.77■□□□□ 0.92
RFX1P22670 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.77■□□□□ 0.92
RFX1P22670 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.77■□□□□ 0.92
RFX1P22670 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.77■□□□□ 0.92
RFX1P22670 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.77■□□□□ 0.92
RFX1P22670 AL161938.1-201ENST00000569833 2180 ntBASIC20.77■□□□□ 0.92
RFX1P22670 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.77■□□□□ 0.92
RFX1P22670 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.77■□□□□ 0.92
RFX1P22670 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.77■□□□□ 0.92
RFX1P22670 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.77■□□□□ 0.92
RFX1P22670 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFX1P22670 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms