Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.89■□□□□ 0.29
MSR1P21757 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
MSR1P21757 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
MSR1P21757 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
MSR1P21757 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MSR1P21757 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MSR1P21757 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
MSR1P21757 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MSR1P21757 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.89■□□□□ 0.29
MSR1P21757 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.89■□□□□ 0.29
MSR1P21757 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
MSR1P21757 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MSR1P21757 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.89■□□□□ 0.29
MSR1P21757 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MSR1P21757 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.88■□□□□ 0.29
MSR1P21757 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.88■□□□□ 0.29
MSR1P21757 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.88■□□□□ 0.29
MSR1P21757 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.88■□□□□ 0.29
MSR1P21757 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
MSR1P21757 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MSR1P21757 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
MSR1P21757 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.88■□□□□ 0.29
MSR1P21757 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.88■□□□□ 0.29
MSR1P21757 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
MSR1P21757 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MSR1P21757 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MSR1P21757 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.88■□□□□ 0.29
MSR1P21757 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
MSR1P21757 AL353807.1-201ENST00000427475 662 ntBASIC16.88■□□□□ 0.29
MSR1P21757 AP002982.1-201ENST00000492365 877 ntBASIC16.88■□□□□ 0.29
MSR1P21757 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.88■□□□□ 0.29
MSR1P21757 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
MSR1P21757 AL445675.2-201ENST00000620291 557 ntBASIC16.88■□□□□ 0.29
MSR1P21757 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.88■□□□□ 0.29
MSR1P21757 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MSR1P21757 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MSR1P21757 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MSR1P21757 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MSR1P21757 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MSR1P21757 HTR7P1-201ENST00000538670 1336 ntBASIC16.88■□□□□ 0.29
MSR1P21757 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
MSR1P21757 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
MSR1P21757 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MSR1P21757 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MSR1P21757 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MSR1P21757 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MSR1P21757 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MSR1P21757 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MSR1P21757 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MSR1P21757 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MSR1P21757 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MSR1P21757 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MSR1P21757 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MSR1P21757 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MSR1P21757 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.87■□□□□ 0.29
MSR1P21757 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MSR1P21757 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
MSR1P21757 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MSR1P21757 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MSR1P21757 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MSR1P21757 NIFKP9-201ENST00000419265 221 ntBASIC16.87■□□□□ 0.29
MSR1P21757 TSPY21P-201ENST00000433481 731 ntBASIC16.87■□□□□ 0.29
MSR1P21757 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MSR1P21757 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.87■□□□□ 0.29
MSR1P21757 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.87■□□□□ 0.29
MSR1P21757 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.87■□□□□ 0.29
MSR1P21757 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.87■□□□□ 0.29
MSR1P21757 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.87■□□□□ 0.29
MSR1P21757 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.87■□□□□ 0.29
MSR1P21757 FAM197Y4-202ENST00000622692 608 ntBASIC16.87■□□□□ 0.29
MSR1P21757 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.87■□□□□ 0.29
MSR1P21757 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MSR1P21757 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MSR1P21757 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.87■□□□□ 0.29
MSR1P21757 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.87■□□□□ 0.29
MSR1P21757 FP475955.4-201ENST00000623131 1990 ntBASIC16.87■□□□□ 0.29
MSR1P21757 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.87■□□□□ 0.29
MSR1P21757 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
MSR1P21757 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
MSR1P21757 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MSR1P21757 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MSR1P21757 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MSR1P21757 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
MSR1P21757 IRX1P1-201ENST00000438849 1838 ntBASIC16.86■□□□□ 0.29
MSR1P21757 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.86■□□□□ 0.29
MSR1P21757 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
MSR1P21757 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
MSR1P21757 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MSR1P21757 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.86■□□□□ 0.29
MSR1P21757 TNXA-203ENST00000507684 2038 ntBASIC16.86■□□□□ 0.29
MSR1P21757 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
MSR1P21757 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
MSR1P21757 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
MSR1P21757 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
MSR1P21757 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
MSR1P21757 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MSR1P21757 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.86■□□□□ 0.29
MSR1P21757 AL353708.3-201ENST00000610272 989 ntBASIC16.86■□□□□ 0.29
MSR1P21757 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
MSR1P21757 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms