Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3BP20337 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3BP20337 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RAB3BP20337 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.75■□□□□ 0.27
RAB3BP20337 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.75■□□□□ 0.27
RAB3BP20337 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.75■□□□□ 0.27
RAB3BP20337 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.75■□□□□ 0.27
RAB3BP20337 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3BP20337 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3BP20337 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
RAB3BP20337 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.75■□□□□ 0.27
RAB3BP20337 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3BP20337 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3BP20337 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
RAB3BP20337 ABALON-201ENST00000629058 1903 ntBASIC16.75■□□□□ 0.27
RAB3BP20337 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
RAB3BP20337 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.75■□□□□ 0.27
RAB3BP20337 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3BP20337 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.75■□□□□ 0.27
RAB3BP20337 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3BP20337 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3BP20337 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3BP20337 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.75■□□□□ 0.27
RAB3BP20337 TFP1-202ENST00000475455 1573 ntBASIC16.75■□□□□ 0.27
RAB3BP20337 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.75■□□□□ 0.27
RAB3BP20337 ANO7L1-203ENST00000602586 1720 ntBASIC16.75■□□□□ 0.27
RAB3BP20337 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3BP20337 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3BP20337 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
RAB3BP20337 SDHAP1-207ENST00000440850 2000 ntBASIC16.75■□□□□ 0.27
RAB3BP20337 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.75■□□□□ 0.27
RAB3BP20337 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3BP20337 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3BP20337 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.75■□□□□ 0.27
RAB3BP20337 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.75■□□□□ 0.27
RAB3BP20337 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.75■□□□□ 0.27
RAB3BP20337 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3BP20337 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3BP20337 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3BP20337 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3BP20337 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
RAB3BP20337 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB3BP20337 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RAB3BP20337 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3BP20337 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
RAB3BP20337 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB3BP20337 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.74■□□□□ 0.27
RAB3BP20337 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
RAB3BP20337 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB3BP20337 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB3BP20337 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB3BP20337 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RAB3BP20337 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB3BP20337 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB3BP20337 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.74■□□□□ 0.27
RAB3BP20337 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3BP20337 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.74■□□□□ 0.27
RAB3BP20337 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB3BP20337 KRT18P61-201ENST00000585825 1298 ntBASIC16.74■□□□□ 0.27
RAB3BP20337 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RAB3BP20337 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3BP20337 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
RAB3BP20337 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RAB3BP20337 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3BP20337 AC104417.2-201ENST00000562989 1793 ntBASIC16.74■□□□□ 0.27
RAB3BP20337 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3BP20337 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB3BP20337 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.73■□□□□ 0.27
RAB3BP20337 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB3BP20337 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
RAB3BP20337 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB3BP20337 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB3BP20337 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.73■□□□□ 0.27
RAB3BP20337 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB3BP20337 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB3BP20337 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB3BP20337 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.73■□□□□ 0.27
RAB3BP20337 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RAB3BP20337 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB3BP20337 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAB3BP20337 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.73■□□□□ 0.27
RAB3BP20337 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.73■□□□□ 0.27
RAB3BP20337 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
RAB3BP20337 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
RAB3BP20337 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.73■□□□□ 0.27
RAB3BP20337 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC16.73■□□□□ 0.27
RAB3BP20337 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAB3BP20337 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
RAB3BP20337 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB3BP20337 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB3BP20337 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB3BP20337 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAB3BP20337 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB3BP20337 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB3BP20337 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RAB3BP20337 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.73■□□□□ 0.27
RAB3BP20337 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB3BP20337 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB3BP20337 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RAB3BP20337 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms