Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.76■□□□□ 0.43
TNFRSF1BP20333 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.76■□□□□ 0.43
TNFRSF1BP20333 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF1BP20333 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.76■□□□□ 0.43
TNFRSF1BP20333 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF1BP20333 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.76■□□□□ 0.43
TNFRSF1BP20333 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF1BP20333 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF1BP20333 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.76■□□□□ 0.43
TNFRSF1BP20333 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF1BP20333 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF1BP20333 AC093525.10-201ENST00000625130 1569 ntBASIC17.76■□□□□ 0.43
TNFRSF1BP20333 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF1BP20333 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TNFRSF1BP20333 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF1BP20333 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF1BP20333 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.76■□□□□ 0.43
TNFRSF1BP20333 SLC29A4P1-201ENST00000398760 971 ntBASIC17.76■□□□□ 0.43
TNFRSF1BP20333 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.76■□□□□ 0.43
TNFRSF1BP20333 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.76■□□□□ 0.43
TNFRSF1BP20333 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.76■□□□□ 0.43
TNFRSF1BP20333 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.76■□□□□ 0.43
TNFRSF1BP20333 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.76■□□□□ 0.43
TNFRSF1BP20333 AC090164.3-201ENST00000610780 2143 ntBASIC17.76■□□□□ 0.43
TNFRSF1BP20333 MYC-209ENST00000641252 345 ntBASIC17.76■□□□□ 0.43
TNFRSF1BP20333 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.76■□□□□ 0.43
TNFRSF1BP20333 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF1BP20333 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TNFRSF1BP20333 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF1BP20333 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF1BP20333 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF1BP20333 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TNFRSF1BP20333 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF1BP20333 Z98044.1-201ENST00000632503 1764 ntBASIC17.76■□□□□ 0.43
TNFRSF1BP20333 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.76■□□□□ 0.43
TNFRSF1BP20333 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF1BP20333 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFRSF1BP20333 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFRSF1BP20333 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TNFRSF1BP20333 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TNFRSF1BP20333 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TNFRSF1BP20333 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TNFRSF1BP20333 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFRSF1BP20333 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TNFRSF1BP20333 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFRSF1BP20333 AC138932.1-201ENST00000534164 6830 ntBASIC17.75■□□□□ 0.43
TNFRSF1BP20333 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFRSF1BP20333 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TNFRSF1BP20333 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TNFRSF1BP20333 TSPY6P-201ENST00000448518 926 ntBASIC17.75■□□□□ 0.43
TNFRSF1BP20333 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.75■□□□□ 0.43
TNFRSF1BP20333 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.75■□□□□ 0.43
TNFRSF1BP20333 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.75■□□□□ 0.43
TNFRSF1BP20333 PNMA6B-201ENST00000538162 1200 ntBASIC17.75■□□□□ 0.43
TNFRSF1BP20333 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.75■□□□□ 0.43
TNFRSF1BP20333 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.75■□□□□ 0.43
TNFRSF1BP20333 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.75■□□□□ 0.43
TNFRSF1BP20333 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFRSF1BP20333 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFRSF1BP20333 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFRSF1BP20333 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFRSF1BP20333 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.75■□□□□ 0.43
TNFRSF1BP20333 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFRSF1BP20333 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFRSF1BP20333 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFRSF1BP20333 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFRSF1BP20333 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TNFRSF1BP20333 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFRSF1BP20333 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TNFRSF1BP20333 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TNFRSF1BP20333 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TNFRSF1BP20333 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFRSF1BP20333 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFRSF1BP20333 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.74■□□□□ 0.43
TNFRSF1BP20333 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.74■□□□□ 0.43
TNFRSF1BP20333 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.74■□□□□ 0.43
TNFRSF1BP20333 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFRSF1BP20333 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.74■□□□□ 0.43
TNFRSF1BP20333 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.74■□□□□ 0.43
TNFRSF1BP20333 AC097658.1-201ENST00000475555 843 ntBASIC17.74■□□□□ 0.43
TNFRSF1BP20333 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.74■□□□□ 0.43
TNFRSF1BP20333 KRT18P16-201ENST00000510337 1294 ntBASIC17.74■□□□□ 0.43
TNFRSF1BP20333 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.74■□□□□ 0.43
TNFRSF1BP20333 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFRSF1BP20333 HLA-B-256ENST00000639848 1089 ntBASIC17.74■□□□□ 0.43
TNFRSF1BP20333 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TNFRSF1BP20333 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFRSF1BP20333 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFRSF1BP20333 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TNFRSF1BP20333 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TNFRSF1BP20333 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFRSF1BP20333 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFRSF1BP20333 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TNFRSF1BP20333 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFRSF1BP20333 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFRSF1BP20333 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFRSF1BP20333 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
TNFRSF1BP20333 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.74■□□□□ 0.43
TNFRSF1BP20333 AL390961.4-201ENST00000623958 2535 ntBASIC17.73■□□□□ 0.43
TNFRSF1BP20333 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms