Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
PDE6GP18545 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC11.84□□□□□ -0.51
PDE6GP18545 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
PDE6GP18545 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC11.84□□□□□ -0.51
PDE6GP18545 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
PDE6GP18545 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC11.84□□□□□ -0.51
PDE6GP18545 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PDE6GP18545 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC11.84□□□□□ -0.51
PDE6GP18545 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
PDE6GP18545 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
PDE6GP18545 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
PDE6GP18545 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
PDE6GP18545 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
PDE6GP18545 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
PDE6GP18545 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
PDE6GP18545 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC11.84□□□□□ -0.51
PDE6GP18545 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
PDE6GP18545 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
PDE6GP18545 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC11.84□□□□□ -0.51
PDE6GP18545 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
PDE6GP18545 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
PDE6GP18545 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
PDE6GP18545 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
PDE6GP18545 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
PDE6GP18545 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.51
PDE6GP18545 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
PDE6GP18545 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC11.83□□□□□ -0.52
PDE6GP18545 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
PDE6GP18545 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
PDE6GP18545 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
PDE6GP18545 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC11.83□□□□□ -0.52
PDE6GP18545 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
PDE6GP18545 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
PDE6GP18545 LINC00896-202ENST00000609602 2128 ntBASIC11.83□□□□□ -0.52
PDE6GP18545 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PDE6GP18545 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC11.83□□□□□ -0.52
PDE6GP18545 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
PDE6GP18545 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC11.83□□□□□ -0.52
PDE6GP18545 AL138724.1-201ENST00000606771 1088 ntBASIC11.83□□□□□ -0.52
PDE6GP18545 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC11.83□□□□□ -0.52
PDE6GP18545 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PDE6GP18545 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
PDE6GP18545 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC11.83□□□□□ -0.52
PDE6GP18545 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
PDE6GP18545 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC11.83□□□□□ -0.52
PDE6GP18545 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
PDE6GP18545 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
PDE6GP18545 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PDE6GP18545 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC11.83□□□□□ -0.52
PDE6GP18545 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC11.83□□□□□ -0.52
PDE6GP18545 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC11.83□□□□□ -0.52
PDE6GP18545 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
PDE6GP18545 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
PDE6GP18545 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC11.83□□□□□ -0.52
PDE6GP18545 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PDE6GP18545 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
PDE6GP18545 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PDE6GP18545 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PDE6GP18545 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
PDE6GP18545 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
PDE6GP18545 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC11.83□□□□□ -0.52
PDE6GP18545 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PDE6GP18545 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
PDE6GP18545 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6GP18545 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6GP18545 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6GP18545 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
PDE6GP18545 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6GP18545 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6GP18545 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC11.82□□□□□ -0.52
PDE6GP18545 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6GP18545 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
PDE6GP18545 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6GP18545 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
PDE6GP18545 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC11.82□□□□□ -0.52
PDE6GP18545 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6GP18545 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
PDE6GP18545 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
PDE6GP18545 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6GP18545 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6GP18545 TEX21P-204ENST00000641479 1693 ntBASIC11.82□□□□□ -0.52
PDE6GP18545 AC124067.4-201ENST00000519691 2379 ntBASIC11.82□□□□□ -0.52
PDE6GP18545 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6GP18545 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
PDE6GP18545 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC11.82□□□□□ -0.52
PDE6GP18545 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6GP18545 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC11.82□□□□□ -0.52
PDE6GP18545 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC11.82□□□□□ -0.52
PDE6GP18545 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6GP18545 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6GP18545 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC11.82□□□□□ -0.52
PDE6GP18545 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC11.82□□□□□ -0.52
PDE6GP18545 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC11.82□□□□□ -0.52
PDE6GP18545 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC11.82□□□□□ -0.52
PDE6GP18545 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC11.82□□□□□ -0.52
PDE6GP18545 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
PDE6GP18545 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6GP18545 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6GP18545 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6GP18545 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms