Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.1■□□□□ 0.97
ATP2A2P16615 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP2A2P16615 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATP2A2P16615 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.1■□□□□ 0.97
ATP2A2P16615 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.09■□□□□ 0.97
ATP2A2P16615 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2A2P16615 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2A2P16615 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2A2P16615 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2A2P16615 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2A2P16615 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2A2P16615 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC21.09■□□□□ 0.97
ATP2A2P16615 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.09■□□□□ 0.97
ATP2A2P16615 KRT18P38-201ENST00000449496 1282 ntBASIC21.09■□□□□ 0.97
ATP2A2P16615 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
ATP2A2P16615 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.09■□□□□ 0.97
ATP2A2P16615 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
ATP2A2P16615 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
ATP2A2P16615 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2A2P16615 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2A2P16615 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2A2P16615 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2A2P16615 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.09■□□□□ 0.97
ATP2A2P16615 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP2A2P16615 AC007225.1-201ENST00000566331 1836 ntBASIC21.08■□□□□ 0.97
ATP2A2P16615 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.08■□□□□ 0.97
ATP2A2P16615 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP2A2P16615 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP2A2P16615 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP2A2P16615 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP2A2P16615 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
ATP2A2P16615 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
ATP2A2P16615 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP2A2P16615 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC21.08■□□□□ 0.97
ATP2A2P16615 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.08■□□□□ 0.97
ATP2A2P16615 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.08■□□□□ 0.97
ATP2A2P16615 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.08■□□□□ 0.97
ATP2A2P16615 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.08■□□□□ 0.97
ATP2A2P16615 AL136038.3-201ENST00000561909 1096 ntBASIC21.08■□□□□ 0.97
ATP2A2P16615 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.08■□□□□ 0.97
ATP2A2P16615 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ATP2A2P16615 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ATP2A2P16615 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.07■□□□□ 0.96
ATP2A2P16615 PHGDH-210ENST00000641115 1638 ntBASIC21.07■□□□□ 0.96
ATP2A2P16615 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP2A2P16615 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.07■□□□□ 0.96
ATP2A2P16615 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP2A2P16615 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC21.07■□□□□ 0.96
ATP2A2P16615 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ATP2A2P16615 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP2A2P16615 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP2A2P16615 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP2A2P16615 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP2A2P16615 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC21.07■□□□□ 0.96
ATP2A2P16615 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP2A2P16615 CA15P1-201ENST00000481698 905 ntBASIC21.07■□□□□ 0.96
ATP2A2P16615 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP2A2P16615 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.07■□□□□ 0.96
ATP2A2P16615 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.07■□□□□ 0.96
ATP2A2P16615 AC012313.10-201ENST00000623509 926 ntBASIC21.07■□□□□ 0.96
ATP2A2P16615 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
ATP2A2P16615 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
ATP2A2P16615 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP2A2P16615 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP2A2P16615 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.07■□□□□ 0.96
ATP2A2P16615 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
ATP2A2P16615 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.07■□□□□ 0.96
ATP2A2P16615 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.06■□□□□ 0.96
ATP2A2P16615 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.06■□□□□ 0.96
ATP2A2P16615 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A2P16615 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
ATP2A2P16615 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A2P16615 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A2P16615 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A2P16615 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A2P16615 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A2P16615 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A2P16615 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A2P16615 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A2P16615 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.06■□□□□ 0.96
ATP2A2P16615 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
ATP2A2P16615 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A2P16615 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.06■□□□□ 0.96
ATP2A2P16615 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.06■□□□□ 0.96
ATP2A2P16615 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.06■□□□□ 0.96
ATP2A2P16615 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.06■□□□□ 0.96
ATP2A2P16615 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.06■□□□□ 0.96
ATP2A2P16615 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A2P16615 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
ATP2A2P16615 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A2P16615 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A2P16615 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A2P16615 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
ATP2A2P16615 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
ATP2A2P16615 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A2P16615 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
ATP2A2P16615 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2A2P16615 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2A2P16615 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
ATP2A2P16615 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms