Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD48P09326 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD48P09326 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD48P09326 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD48P09326 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.81■□□□□ 0.76
CD48P09326 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CD48P09326 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.81■□□□□ 0.76
CD48P09326 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CD48P09326 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD48P09326 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.81■□□□□ 0.76
CD48P09326 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD48P09326 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD48P09326 AC004980.1-204ENST00000429707 299 ntBASIC19.81■□□□□ 0.76
CD48P09326 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.81■□□□□ 0.76
CD48P09326 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.81■□□□□ 0.76
CD48P09326 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CD48P09326 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.81■□□□□ 0.76
CD48P09326 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.81■□□□□ 0.76
CD48P09326 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD48P09326 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD48P09326 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD48P09326 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD48P09326 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD48P09326 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD48P09326 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CD48P09326 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD48P09326 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD48P09326 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD48P09326 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CD48P09326 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CD48P09326 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CD48P09326 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CD48P09326 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CD48P09326 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.8■□□□□ 0.76
CD48P09326 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CD48P09326 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CD48P09326 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.8■□□□□ 0.76
CD48P09326 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CD48P09326 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CD48P09326 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.8■□□□□ 0.76
CD48P09326 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.8■□□□□ 0.76
CD48P09326 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.8■□□□□ 0.76
CD48P09326 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CD48P09326 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.8■□□□□ 0.76
CD48P09326 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CD48P09326 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CD48P09326 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.8■□□□□ 0.76
CD48P09326 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CD48P09326 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CD48P09326 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CD48P09326 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CD48P09326 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CD48P09326 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CD48P09326 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CD48P09326 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CD48P09326 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CD48P09326 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CD48P09326 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CD48P09326 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CD48P09326 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CD48P09326 AP002982.1-201ENST00000492365 877 ntBASIC19.79■□□□□ 0.76
CD48P09326 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.79■□□□□ 0.76
CD48P09326 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CD48P09326 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CD48P09326 FAM197Y4-202ENST00000622692 608 ntBASIC19.79■□□□□ 0.76
CD48P09326 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CD48P09326 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CD48P09326 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CD48P09326 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CD48P09326 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CD48P09326 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CD48P09326 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.79■□□□□ 0.76
CD48P09326 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.78■□□□□ 0.76
CD48P09326 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
CD48P09326 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CD48P09326 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CD48P09326 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CD48P09326 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CD48P09326 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
CD48P09326 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CD48P09326 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CD48P09326 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CD48P09326 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.78■□□□□ 0.76
CD48P09326 TSPY21P-201ENST00000433481 731 ntBASIC19.78■□□□□ 0.76
CD48P09326 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CD48P09326 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CD48P09326 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.78■□□□□ 0.76
CD48P09326 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CD48P09326 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.78■□□□□ 0.76
CD48P09326 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.78■□□□□ 0.76
CD48P09326 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.78■□□□□ 0.76
CD48P09326 AL353708.3-201ENST00000610272 989 ntBASIC19.78■□□□□ 0.76
CD48P09326 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CD48P09326 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CD48P09326 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CD48P09326 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CD48P09326 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CD48P09326 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CD48P09326 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.78■□□□□ 0.76
CD48P09326 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms